Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Shmt1P50431 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Shmt1P50431 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm11878-201ENSMUST00000117908 400 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm13482-201ENSMUST00000119842 254 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm12884-201ENSMUST00000120371 325 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
Shmt1P50431 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm25913-201ENSMUST00000157617 135 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm23852-201ENSMUST00000158376 77 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm24225-201ENSMUST00000158825 98 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm16101-201ENSMUST00000160695 430 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Mir3104-201ENSMUST00000174911 63 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm19898-201ENSMUST00000177490 251 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm22243-201ENSMUST00000178754 120 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm16378-201ENSMUST00000179168 342 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Mir7222-201ENSMUST00000183740 75 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Mir7074-201ENSMUST00000183884 63 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm28660-201ENSMUST00000186496 253 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm37881-201ENSMUST00000193001 421 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Trbv8-201ENSMUST00000194020 285 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Gm44989-201ENSMUST00000204749 217 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm3690-201ENSMUST00000211341 262 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm45499-201ENSMUST00000211656 280 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm45742-201ENSMUST00000212400 433 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Shmt1P50431 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Shmt1P50431 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.82□□□□□ -1.64
Shmt1P50431 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.82□□□□□ -1.64
Shmt1P50431 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Shmt1P50431 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Shmt1P50431 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Shmt1P50431 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Shmt1P50431 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Shmt1P50431 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Shmt1P50431 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm13379-201ENSMUST00000118053 621 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm11322-201ENSMUST00000118095 435 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm12935-201ENSMUST00000119352 246 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm14392-201ENSMUST00000120332 401 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm15387-201ENSMUST00000120421 648 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Shmt1P50431 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Shmt1P50431 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm37164-201ENSMUST00000192809 637 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm37523-201ENSMUST00000194901 412 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm8041-201ENSMUST00000199755 616 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Shmt1P50431 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.81□□□□□ -1.64
Shmt1P50431 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Shmt1P50431 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Shmt1P50431 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Shmt1P50431 Gm23345-201ENSMUST00000083817 150 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Gm5518-201ENSMUST00000084171 648 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Shmt1P50431 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Shmt1P50431 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.81□□□□□ -1.64
Shmt1P50431 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Shmt1P50431 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.81□□□□□ -1.64
Shmt1P50431 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Shmt1P50431 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Shmt1P50431 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms