Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm29062-201ENSMUST00000186032 694 ntBASIC3.26□□□□□ -1.89
P20040 Gm29574-201ENSMUST00000186226 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm6947-201ENSMUST00000186254 78 ntBASIC3.26□□□□□ -1.89
P20040 Gm28828-201ENSMUST00000186601 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm28057-201ENSMUST00000186603 615 ntBASIC3.26□□□□□ -1.89
P20040 Gm28255-201ENSMUST00000187101 694 ntBASIC3.26□□□□□ -1.89
P20040 Gm29307-201ENSMUST00000187367 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm28397-201ENSMUST00000187970 699 ntBASIC3.26□□□□□ -1.89
P20040 Gm28896-201ENSMUST00000188609 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm29545-201ENSMUST00000188878 694 ntBASIC3.26□□□□□ -1.89
P20040 Gm29339-201ENSMUST00000189613 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm19891-201ENSMUST00000189771 303 ntBASIC3.26□□□□□ -1.89
P20040 Gm28159-201ENSMUST00000190296 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm29366-201ENSMUST00000190481 699 ntBASIC3.26□□□□□ -1.89
P20040 Gm29407-201ENSMUST00000191468 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm37433-201ENSMUST00000192695 678 ntBASIC3.26□□□□□ -1.89
P20040 Gm37441-201ENSMUST00000194430 678 ntBASIC3.26□□□□□ -1.89
P20040 Gm38107-201ENSMUST00000194873 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm37575-201ENSMUST00000195467 309 ntBASIC3.26□□□□□ -1.89
P20040 Gm18225-201ENSMUST00000216708 742 ntBASIC3.26□□□□□ -1.89
P20040 Gm8249-201ENSMUST00000219225 465 ntBASIC3.26□□□□□ -1.89
P20040 Gm8274-201ENSMUST00000219820 463 ntBASIC3.26□□□□□ -1.89
P20040 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
P20040 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.26□□□□□ -1.89
P20040 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.26□□□□□ -1.89
P20040 Gm23443-201ENSMUST00000082916 128 ntBASIC3.26□□□□□ -1.89
P20040 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
P20040 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
P20040 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
P20040 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
P20040 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
P20040 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
P20040 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
P20040 Gm43216-201ENSMUST00000196295 1333 ntBASIC3.25□□□□□ -1.89
P20040 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
P20040 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
P20040 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
P20040 Gm25765-201ENSMUST00000104100 132 ntBASIC3.25□□□□□ -1.89
P20040 Gm26418-201ENSMUST00000104275 137 ntBASIC3.25□□□□□ -1.89
P20040 Gm24792-201ENSMUST00000104286 128 ntBASIC3.25□□□□□ -1.89
P20040 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
P20040 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
P20040 Gm14570-201ENSMUST00000119444 391 ntBASIC3.25□□□□□ -1.89
P20040 Gm22478-201ENSMUST00000122570 154 ntBASIC3.25□□□□□ -1.89
P20040 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.25□□□□□ -1.89
P20040 Gm2892-201ENSMUST00000145537 711 ntBASIC3.25□□□□□ -1.89
P20040 Gm8161-201ENSMUST00000168739 481 ntBASIC3.25□□□□□ -1.89
P20040 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
P20040 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
P20040 Gm5527-201ENSMUST00000179821 642 ntBASIC3.25□□□□□ -1.89
P20040 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.25□□□□□ -1.89
P20040 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.25□□□□□ -1.89
P20040 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.25□□□□□ -1.89
P20040 Gm7634-201ENSMUST00000185778 553 ntBASIC3.25□□□□□ -1.89
P20040 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
P20040 Gm28552-201ENSMUST00000190725 388 ntBASIC3.25□□□□□ -1.89
P20040 Gm38332-201ENSMUST00000194189 147 ntBASIC3.25□□□□□ -1.89
P20040 Gm18429-201ENSMUST00000198707 421 ntBASIC3.25□□□□□ -1.89
P20040 Gm42526-201ENSMUST00000198956 393 ntBASIC3.25□□□□□ -1.89
P20040 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.25□□□□□ -1.89
P20040 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.25□□□□□ -1.89
P20040 Gm43967-201ENSMUST00000203787 301 ntBASIC3.25□□□□□ -1.89
P20040 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.25□□□□□ -1.89
P20040 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
P20040 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
P20040 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.25□□□□□ -1.89
P20040 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.25□□□□□ -1.89
P20040 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.25□□□□□ -1.89
P20040 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
P20040 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
P20040 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
P20040 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
P20040 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
P20040 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.24□□□□□ -1.89
P20040 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.24□□□□□ -1.89
P20040 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.24□□□□□ -1.89
P20040 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
P20040 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
P20040 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
P20040 Gm15108-201ENSMUST00000116160 803 ntBASIC3.24□□□□□ -1.89
P20040 Gm13419-201ENSMUST00000121711 271 ntBASIC3.24□□□□□ -1.89
P20040 Gm14162-201ENSMUST00000121985 601 ntBASIC3.24□□□□□ -1.89
P20040 Gm15111-201ENSMUST00000122142 878 ntBASIC3.24□□□□□ -1.89
P20040 Gm15038-201ENSMUST00000122144 296 ntBASIC3.24□□□□□ -1.89
P20040 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
P20040 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.24□□□□□ -1.89
P20040 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.24□□□□□ -1.89
P20040 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.24□□□□□ -1.89
P20040 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.24□□□□□ -1.89
P20040 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
P20040 Gm26276-201ENSMUST00000157099 109 ntBASIC3.24□□□□□ -1.89
P20040 Gm24550-201ENSMUST00000158648 279 ntBASIC3.24□□□□□ -1.89
P20040 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
P20040 Mir713-201ENSMUST00000178651 108 ntBASIC3.24□□□□□ -1.89
P20040 Gm26746-201ENSMUST00000181722 487 ntBASIC3.24□□□□□ -1.89
P20040 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
P20040 Gm6501-201ENSMUST00000187178 916 ntBASIC3.24□□□□□ -1.89
P20040 Gm37495-201ENSMUST00000194590 264 ntBASIC3.24□□□□□ -1.89
P20040 Gm44404-201ENSMUST00000203979 636 ntBASIC3.24□□□□□ -1.89
P20040 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms