Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm26298-201ENSMUST00000116956 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm23844-201ENSMUST00000116959 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm24484-201ENSMUST00000117009 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm25347-201ENSMUST00000117026 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm22112-201ENSMUST00000117032 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm5757-201ENSMUST00000117494 528 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm11313-201ENSMUST00000118779 432 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm13677-201ENSMUST00000120739 595 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm23167-201ENSMUST00000157155 103 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm23411-201ENSMUST00000157988 62 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm3076-201ENSMUST00000161613 451 ntBASIC5.57□□□□□ -1.52
RaraP11416 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RaraP11416 Gm22991-201ENSMUST00000178126 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm25754-201ENSMUST00000178653 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm22419-201ENSMUST00000178780 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm24802-201ENSMUST00000178897 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm25208-201ENSMUST00000178964 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm24567-201ENSMUST00000179294 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm23943-201ENSMUST00000179712 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm25228-201ENSMUST00000180121 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm23304-201ENSMUST00000180209 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm6055-201ENSMUST00000180532 378 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm27699-201ENSMUST00000183553 180 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm27490-201ENSMUST00000184754 128 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm8600-201ENSMUST00000186320 905 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm37746-201ENSMUST00000193249 198 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm43739-201ENSMUST00000198294 307 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm43415-201ENSMUST00000201934 750 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm9318-201ENSMUST00000222444 438 ntBASIC5.57□□□□□ -1.52
RaraP11416 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RaraP11416 Mir449a-201ENSMUST00000083641 91 ntBASIC5.57□□□□□ -1.52
RaraP11416 Rny1-201ENSMUST00000083767 112 ntBASIC5.57□□□□□ -1.52
RaraP11416 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.57□□□□□ -1.52
RaraP11416 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.57□□□□□ -1.52
RaraP11416 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.56□□□□□ -1.52
RaraP11416 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RaraP11416 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm13172-201ENSMUST00000118685 256 ntBASIC5.56□□□□□ -1.52
RaraP11416 Gm11975-201ENSMUST00000118772 481 ntBASIC5.56□□□□□ -1.52
RaraP11416 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.56□□□□□ -1.52
RaraP11416 Gm23539-201ENSMUST00000157537 224 ntBASIC5.56□□□□□ -1.52
RaraP11416 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.56□□□□□ -1.52
RaraP11416 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.56□□□□□ -1.52
RaraP11416 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.56□□□□□ -1.52
RaraP11416 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms