Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hoxd3P09027 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Hoxd3P09027 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Hoxd3P09027 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hoxd3P09027 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm42881-201ENSMUST00000198636 3344 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm8750-201ENSMUST00000173278 1537 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm43900-201ENSMUST00000204868 2669 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm22370-201ENSMUST00000102422 83 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm15058-201ENSMUST00000117689 458 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm12396-201ENSMUST00000121600 306 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm14970-201ENSMUST00000122289 355 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm5353-201ENSMUST00000139800 793 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm20480-201ENSMUST00000173953 250 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Mir7220-201ENSMUST00000183978 60 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm9320-201ENSMUST00000184151 473 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm29592-201ENSMUST00000189434 370 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm37624-201ENSMUST00000193751 219 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm38076-201ENSMUST00000193889 450 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Mir7661-201ENSMUST00000197023 61 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm32158-201ENSMUST00000200135 404 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm42453-201ENSMUST00000200477 409 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm34091-201ENSMUST00000200875 604 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm5318-201ENSMUST00000205249 406 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm44984-201ENSMUST00000207802 394 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm26984-201ENSMUST00000182345 3510 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hoxd3P09027 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm37186-201ENSMUST00000195629 2861 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.67□□□□□ -1.66
Hoxd3P09027 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm25560-201ENSMUST00000104606 176 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm14706-201ENSMUST00000117744 255 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm13811-201ENSMUST00000117800 256 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 n-R5s48-201ENSMUST00000122482 110 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm25962-201ENSMUST00000157173 168 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm26186-201ENSMUST00000157689 125 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm24876-201ENSMUST00000158780 92 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm23474-201ENSMUST00000158884 75 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm3191-201ENSMUST00000167139 346 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm6214-201ENSMUST00000178845 541 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm5058-201ENSMUST00000187331 463 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm44316-201ENSMUST00000199274 97 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm44446-201ENSMUST00000204864 255 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm46194-201ENSMUST00000218136 320 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms