Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm7391-201ENSMUST00000178680 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm7375-201ENSMUST00000179232 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm3681-201ENSMUST00000179940 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm26991-201ENSMUST00000180950 620 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm29104-201ENSMUST00000186304 222 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm20885-201ENSMUST00000190192 654 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm5829-201ENSMUST00000191383 351 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm38231-201ENSMUST00000192030 347 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm29740-201ENSMUST00000193182 655 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm36866-201ENSMUST00000193343 657 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm36047-201ENSMUST00000193659 657 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm20857-201ENSMUST00000194766 657 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm20858-201ENSMUST00000195459 657 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm18585-201ENSMUST00000215197 556 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.31□□□□□ -1.72
Col3a1P08121 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col3a1P08121 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Col3a1P08121 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col3a1P08121 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm25407-201ENSMUST00000104102 134 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm23609-201ENSMUST00000104542 127 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm14649-201ENSMUST00000121814 324 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm24936-201ENSMUST00000122598 247 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm23587-201ENSMUST00000157658 84 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm26000-201ENSMUST00000157991 107 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm6445-201ENSMUST00000189515 1112 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm19224-201ENSMUST00000190477 793 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm7897-201ENSMUST00000193981 554 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm2710-201ENSMUST00000073196 603 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 AF357428-201ENSMUST00000083815 69 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
Col3a1P08121 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 AC154386.1-201ENSMUST00000222753 2871 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm12598-201ENSMUST00000117333 830 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm12722-201ENSMUST00000118507 493 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm11866-201ENSMUST00000120209 335 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm11407-201ENSMUST00000120362 1058 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm11404-201ENSMUST00000120872 494 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm16458-201ENSMUST00000121428 502 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm13508-201ENSMUST00000121639 775 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm24393-201ENSMUST00000158135 97 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm25519-201ENSMUST00000158392 127 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm24768-201ENSMUST00000158512 94 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Gm18635-201ENSMUST00000199020 1060 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm38395-201ENSMUST00000199904 830 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm43232-201ENSMUST00000201346 364 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm18672-201ENSMUST00000208035 270 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm32300-201ENSMUST00000221735 515 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Gm5374-201ENSMUST00000222868 657 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 AC117656.3-204ENSMUST00000225656 859 ntBASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col3a1P08121 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col3a1P08121 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col3a1P08121 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col3a1P08121 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col3a1P08121 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col3a1P08121 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms