Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm23602-201ENSMUST00000157258 132 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm25535-201ENSMUST00000175364 125 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm3933-201ENSMUST00000195391 439 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm8874-201ENSMUST00000196826 286 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm38395-201ENSMUST00000199904 830 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm7041-201ENSMUST00000201227 524 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm44523-201ENSMUST00000205616 417 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm23532-201ENSMUST00000104569 112 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Mir466n-201ENSMUST00000104798 94 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm15854-201ENSMUST00000118879 808 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm11645-201ENSMUST00000121589 649 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm12095-201ENSMUST00000121962 816 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm23666-201ENSMUST00000158053 116 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm21809-201ENSMUST00000178495 468 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm17412-201ENSMUST00000179261 468 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm18406-201ENSMUST00000185872 669 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm9375-201ENSMUST00000208899 903 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Shank1D3YZU1 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.49□□□□□ -1.85
Shank1D3YZU1 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm24831-201ENSMUST00000116778 126 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm12149-201ENSMUST00000117511 654 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm18417-201ENSMUST00000176564 648 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm27845-201ENSMUST00000184479 114 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm7142-201ENSMUST00000194232 586 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm44319-201ENSMUST00000196974 93 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm44128-201ENSMUST00000204909 219 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm45912-201ENSMUST00000210646 543 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 AC158807.1-201ENSMUST00000217959 187 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm24254-201ENSMUST00000083702 104 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm21286-201ENSMUST00000098035 545 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm13478-201ENSMUST00000118312 413 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm15266-201ENSMUST00000119635 255 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm15166-201ENSMUST00000120790 385 ntBASIC3.48□□□□□ -1.85
Shank1D3YZU1 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms