Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Snord65-201ENSMUST00000104269 72 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm15785-201ENSMUST00000119145 694 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm7071-201ENSMUST00000120458 462 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm16021-201ENSMUST00000121176 219 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Olfr895-201ENSMUST00000093864 951 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Gm6373-201ENSMUST00000121026 360 ntBASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Gm6245-201ENSMUST00000164699 768 ntBASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Gm44343-201ENSMUST00000196702 90 ntBASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Scn3aA2ASI5 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm26027-201ENSMUST00000122725 268 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm23824-201ENSMUST00000158741 276 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm27532-201ENSMUST00000183726 113 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm37837-201ENSMUST00000191743 604 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm43925-201ENSMUST00000203498 206 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm6230-201ENSMUST00000208077 780 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm17917-201ENSMUST00000218561 953 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.48□□□□□ -1.85
Scn3aA2ASI5 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Mir466i-201ENSMUST00000116924 121 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Gm28339-201ENSMUST00000185845 696 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Gm21742-201ENSMUST00000189352 548 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Gm36638-201ENSMUST00000193295 400 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Gm26072-201ENSMUST00000083135 107 ntBASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms