Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim3Q9R1R2 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim3Q9R1R2 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.56□□□□□ -1.84
Trim3Q9R1R2 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm12427-201ENSMUST00000117719 302 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm12889-201ENSMUST00000118684 241 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm13831-201ENSMUST00000118764 302 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm5929-201ENSMUST00000166883 487 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Mir6907-201ENSMUST00000183764 71 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm37708-201ENSMUST00000192337 895 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm38053-201ENSMUST00000193938 160 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm7897-201ENSMUST00000193981 554 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm3189-201ENSMUST00000205595 832 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Snora70-201ENSMUST00000083047 137 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Mir30e-201ENSMUST00000083475 92 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Trim3Q9R1R2 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.55□□□□□ -1.84
Trim3Q9R1R2 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm25313-201ENSMUST00000101817 116 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm11393-201ENSMUST00000118019 288 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm22889-201ENSMUST00000158639 58 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm23287-201ENSMUST00000179427 116 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm23143-201ENSMUST00000180137 116 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm28438-201ENSMUST00000188299 345 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm37791-201ENSMUST00000195081 286 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm45162-201ENSMUST00000209013 618 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm45539-201ENSMUST00000210313 428 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm18225-201ENSMUST00000216708 742 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm24871-201ENSMUST00000083099 116 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim3Q9R1R2 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm23697-201ENSMUST00000103897 110 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm12900-201ENSMUST00000120919 573 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm13511-201ENSMUST00000121167 363 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm14903-201ENSMUST00000122435 537 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms