Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Mir667-201ENSMUST00000102441 92 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm24890-201ENSMUST00000104389 102 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm23608-201ENSMUST00000104545 128 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm23532-201ENSMUST00000104569 112 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Lipe-203ENSMUST00000105177 1251 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm12782-201ENSMUST00000117519 727 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm13650-201ENSMUST00000117729 433 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm11878-201ENSMUST00000117908 400 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm13379-201ENSMUST00000118053 621 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm15387-201ENSMUST00000120421 648 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm13574-201ENSMUST00000120482 394 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm12103-201ENSMUST00000121892 362 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm12858-201ENSMUST00000121913 208 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm12885-201ENSMUST00000122246 328 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Snord92-201ENSMUST00000175548 85 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm27921-201ENSMUST00000183968 108 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm37164-201ENSMUST00000192809 637 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm45588-201ENSMUST00000211213 630 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm18850-201ENSMUST00000211578 388 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm5518-201ENSMUST00000084171 648 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Trem1Q9JKE2 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm22899-201ENSMUST00000104540 131 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm12025-201ENSMUST00000117768 144 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm24444-201ENSMUST00000157244 308 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm25908-201ENSMUST00000157624 98 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm25660-201ENSMUST00000158470 104 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm16026-202ENSMUST00000159695 772 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm9027-201ENSMUST00000165914 661 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Mir7653-201ENSMUST00000184358 61 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm28396-201ENSMUST00000190309 379 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm4248-201ENSMUST00000196905 316 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm19177-201ENSMUST00000204520 613 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm7751-201ENSMUST00000212868 709 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm18015-201ENSMUST00000214879 316 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 LOC667541-201ENSMUST00000223408 278 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm22350-201ENSMUST00000083924 156 ntBASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Trem1Q9JKE2 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm23879-201ENSMUST00000116874 126 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm12173-201ENSMUST00000117622 273 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm13831-201ENSMUST00000118764 302 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm12543-201ENSMUST00000120410 543 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms