Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm14050-201ENSMUST00000117052 346 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm13511-201ENSMUST00000121167 363 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm16331-201ENSMUST00000144274 498 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm24914-201ENSMUST00000157285 313 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm23505-201ENSMUST00000158989 130 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Mir5710-201ENSMUST00000176884 69 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm27033-201ENSMUST00000183226 544 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm28030-201ENSMUST00000184987 138 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm5552-201ENSMUST00000197149 515 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm5322-201ENSMUST00000206142 699 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm6842-201ENSMUST00000211361 390 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm8274-201ENSMUST00000219820 463 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm12025-201ENSMUST00000117768 144 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm11433-201ENSMUST00000118318 228 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm15951-201ENSMUST00000118377 400 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm12722-201ENSMUST00000118507 493 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm14975-201ENSMUST00000118741 664 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm11913-201ENSMUST00000119094 336 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm23716-201ENSMUST00000157348 144 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm21816-201ENSMUST00000179255 360 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm5473-201ENSMUST00000179326 642 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm43198-201ENSMUST00000200927 326 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm44611-201ENSMUST00000207507 355 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Gm34779-201ENSMUST00000210036 263 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Lima1Q9ERG0 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm12739-201ENSMUST00000119769 382 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm22345-201ENSMUST00000122644 107 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm15733-201ENSMUST00000132957 242 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm23234-201ENSMUST00000157304 134 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm24745-201ENSMUST00000157840 85 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm25860-201ENSMUST00000158252 126 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm23773-201ENSMUST00000158985 296 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm43441-201ENSMUST00000201458 205 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm19039-201ENSMUST00000204363 575 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm18120-201ENSMUST00000220079 511 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm9818-201ENSMUST00000050900 255 ntBASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Lima1Q9ERG0 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms