Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm11433-201ENSMUST00000118318 228 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm5754-201ENSMUST00000118774 892 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm11704-201ENSMUST00000120031 214 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm14383-201ENSMUST00000121637 386 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm12001-201ENSMUST00000121727 913 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm22310-201ENSMUST00000157509 116 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm26005-201ENSMUST00000158802 134 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm19637-201ENSMUST00000185933 579 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm18505-201ENSMUST00000187360 790 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm37001-201ENSMUST00000193377 190 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm7119-201ENSMUST00000221345 695 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm24950-201ENSMUST00000082768 191 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm23971-201ENSMUST00000083317 191 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm26121-201ENSMUST00000083364 162 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm23849-201ENSMUST00000083833 191 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm26316-201ENSMUST00000083886 191 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm24987-201ENSMUST00000104453 134 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm13650-201ENSMUST00000117729 433 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm14142-201ENSMUST00000117833 296 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm14589-201ENSMUST00000121640 727 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm23326-201ENSMUST00000157419 105 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm24739-201ENSMUST00000158855 292 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm20773-201ENSMUST00000178940 681 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm27535-201ENSMUST00000183814 157 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm37104-201ENSMUST00000193278 196 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm44343-201ENSMUST00000196702 90 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm43476-201ENSMUST00000197873 405 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm8423-201ENSMUST00000211387 607 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm18225-201ENSMUST00000216708 742 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.36□□□□□ -1.87
Cdc40Q9DC48 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm12392-201ENSMUST00000118014 938 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm13076-201ENSMUST00000118041 204 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm14975-201ENSMUST00000118741 664 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm6079-201ENSMUST00000121356 404 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm22208-201ENSMUST00000122658 110 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm24244-201ENSMUST00000157317 130 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm23865-201ENSMUST00000157723 97 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms