Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm22718-201ENSMUST00000122701 315 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Snora81-201ENSMUST00000157310 178 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm25438-201ENSMUST00000158281 110 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm3454-201ENSMUST00000185571 412 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm44343-201ENSMUST00000196702 90 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm6230-201ENSMUST00000208077 780 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm4052-201ENSMUST00000220890 451 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm14811-201ENSMUST00000117070 117 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm14622-201ENSMUST00000117117 468 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm12095-201ENSMUST00000121962 816 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm22034-201ENSMUST00000157283 134 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm26045-201ENSMUST00000157862 97 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm14527-201ENSMUST00000179300 639 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm42621-201ENSMUST00000198114 275 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm44754-201ENSMUST00000208155 400 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm7407-201ENSMUST00000208301 568 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm18644-201ENSMUST00000211458 815 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm22971-201ENSMUST00000083305 97 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.36□□□□□ -1.87
Ccdc3Q9D6Y1 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm11965-201ENSMUST00000122017 277 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm23773-201ENSMUST00000158985 296 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm28069-201ENSMUST00000189926 214 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm22897-201ENSMUST00000197860 128 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm4987-201ENSMUST00000078326 408 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.35□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm23256-201ENSMUST00000102235 110 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm26140-201ENSMUST00000103807 110 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm26145-201ENSMUST00000104476 127 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm14119-201ENSMUST00000119511 235 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm26254-201ENSMUST00000122491 118 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm24936-201ENSMUST00000122598 247 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms