Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm19599-201ENSMUST00000218898 358 ntBASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm26437-201ENSMUST00000082595 105 ntBASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm24144-201ENSMUST00000082632 111 ntBASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc39Q9D5Y1 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm15060-201ENSMUST00000119550 948 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm2892-201ENSMUST00000145537 711 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm24008-201ENSMUST00000157733 138 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Atp2b4-208ENSMUST00000167348 243 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Mir3473c-201ENSMUST00000175262 81 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm8807-201ENSMUST00000179328 492 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm25942-201ENSMUST00000180080 110 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm29534-201ENSMUST00000187328 382 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm5309-201ENSMUST00000197416 677 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm43039-201ENSMUST00000202883 963 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm44137-201ENSMUST00000203670 367 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm5265-201ENSMUST00000076828 342 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.23□□□□□ -1.73
Ccdc39Q9D5Y1 Gm44288-201ENSMUST00000205061 2795 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm13076-201ENSMUST00000118041 204 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm16471-201ENSMUST00000121940 618 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm14905-201ENSMUST00000122351 639 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm24854-201ENSMUST00000158025 98 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm26005-201ENSMUST00000158802 134 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm38330-201ENSMUST00000192743 959 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm38356-201ENSMUST00000194313 408 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm43531-201ENSMUST00000200676 1114 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm45034-201ENSMUST00000206831 482 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 AC122901.2-201ENSMUST00000216926 285 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr844-201ENSMUST00000054106 930 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm25630-201ENSMUST00000084000 162 ntBASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Ccdc39Q9D5Y1 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Ccdc39Q9D5Y1 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm27592-201ENSMUST00000157729 126 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm25520-201ENSMUST00000158389 118 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm25026-201ENSMUST00000175017 188 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm22174-201ENSMUST00000175050 125 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm22692-201ENSMUST00000175055 125 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm27634-201ENSMUST00000175060 126 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm22460-201ENSMUST00000175269 124 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm24811-201ENSMUST00000175313 100 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm25535-201ENSMUST00000175364 125 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm24365-201ENSMUST00000175384 125 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm44310-201ENSMUST00000175424 126 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm22639-201ENSMUST00000175591 125 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm24979-201ENSMUST00000178626 126 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm27743-201ENSMUST00000185136 126 ntBASIC4.21□□□□□ -1.74
Ccdc39Q9D5Y1 Gm28148-201ENSMUST00000186924 697 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms