Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Vps28Q9D1C8 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.21□□□□□ -1.74
Vps28Q9D1C8 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Vps28Q9D1C8 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Vps28Q9D1C8 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.21□□□□□ -1.74
Vps28Q9D1C8 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm22269-201ENSMUST00000104002 130 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm22472-201ENSMUST00000104115 134 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm25560-201ENSMUST00000104606 176 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm13731-201ENSMUST00000117332 196 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm14605-201ENSMUST00000120599 268 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm25104-201ENSMUST00000122476 163 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm22817-201ENSMUST00000157448 356 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm25427-201ENSMUST00000157605 103 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm25883-201ENSMUST00000157781 271 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm25456-201ENSMUST00000157952 109 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm23385-201ENSMUST00000158592 295 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm24520-201ENSMUST00000179510 110 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm27695-201ENSMUST00000184301 91 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm28847-201ENSMUST00000186778 700 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm29365-201ENSMUST00000189461 699 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Trbv11-201ENSMUST00000194354 260 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.2□□□□□ -1.74
Vps28Q9D1C8 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm14731-201ENSMUST00000119216 376 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm13273-201ENSMUST00000119737 159 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm22818-201ENSMUST00000157446 104 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm17177-201ENSMUST00000169144 483 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Mir6926-201ENSMUST00000184562 68 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm29299-201ENSMUST00000185609 923 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms