Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm24188-201ENSMUST00000157980 108 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm24217-201ENSMUST00000158260 133 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm25365-201ENSMUST00000158852 121 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm28597-201ENSMUST00000187664 666 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm17811-201ENSMUST00000206193 387 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
Ddx56Q9D0R4 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm13550-201ENSMUST00000118185 525 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm5060-201ENSMUST00000120072 599 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm6062-201ENSMUST00000120462 631 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm14784-201ENSMUST00000121604 663 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm7840-201ENSMUST00000122086 533 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm25294-201ENSMUST00000122791 104 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm25923-201ENSMUST00000158312 138 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm16378-201ENSMUST00000179168 342 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm27355-201ENSMUST00000185045 128 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm28474-201ENSMUST00000188501 315 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm18775-201ENSMUST00000190763 586 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm37732-201ENSMUST00000194377 316 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm42566-201ENSMUST00000197120 643 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 AC126673.2-201ENSMUST00000221052 686 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 AC125523.1-201ENSMUST00000228018 934 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm24031-201ENSMUST00000083930 131 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm25821-201ENSMUST00000093657 133 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 AC124426.1-203ENSMUST00000221814 1362 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Ddx56Q9D0R4 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm23193-201ENSMUST00000102427 82 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm23709-201ENSMUST00000104364 130 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm12982-201ENSMUST00000117408 190 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm12062-201ENSMUST00000117533 259 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm12370-201ENSMUST00000117809 604 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm14292-201ENSMUST00000118761 456 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm12852-201ENSMUST00000119478 719 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm12137-201ENSMUST00000119565 346 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm12486-201ENSMUST00000120887 541 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm24751-201ENSMUST00000157844 102 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm37431-201ENSMUST00000195102 111 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm43005-201ENSMUST00000199015 648 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm19457-201ENSMUST00000200995 448 ntBASIC4.88□□□□□ -1.63
Ddx56Q9D0R4 Gm44523-201ENSMUST00000205616 417 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms