Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm23669-201ENSMUST00000157470 128 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Mir3964-201ENSMUST00000174898 74 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm22290-201ENSMUST00000177655 107 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm22583-201ENSMUST00000178031 107 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm26430-201ENSMUST00000178054 107 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm24100-201ENSMUST00000178592 79 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm24137-201ENSMUST00000180055 79 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm22391-201ENSMUST00000180356 79 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm29484-201ENSMUST00000186067 324 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm19641-201ENSMUST00000188432 417 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm28951-201ENSMUST00000190742 313 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm37455-201ENSMUST00000191993 529 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm43043-201ENSMUST00000196579 412 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm43144-201ENSMUST00000198256 485 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm44360-201ENSMUST00000200081 82 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm35648-201ENSMUST00000202304 475 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm43968-201ENSMUST00000203388 389 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm9560-201ENSMUST00000205012 1201 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm45105-201ENSMUST00000207824 397 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5□□□□□ -1.61
Ssu72Q9CY97 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5□□□□□ -1.61
Ssu72Q9CY97 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5□□□□□ -1.61
Ssu72Q9CY97 AC153506.2-201ENSMUST00000218051 257 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5□□□□□ -1.61
Ssu72Q9CY97 AC154840.1-201ENSMUST00000225216 408 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm16335-201ENSMUST00000077495 309 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Gm25929-201ENSMUST00000082784 107 ntBASIC5□□□□□ -1.61
Ssu72Q9CY97 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Ssu72Q9CY97 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ssu72Q9CY97 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm14142-201ENSMUST00000117833 296 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm24059-201ENSMUST00000157493 312 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm24504-201ENSMUST00000157679 100 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm21999-201ENSMUST00000165985 387 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm38044-201ENSMUST00000192964 487 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm36954-201ENSMUST00000195362 363 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm43456-201ENSMUST00000202519 457 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm18791-201ENSMUST00000204611 726 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm44132-201ENSMUST00000205142 151 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm10108-201ENSMUST00000078246 319 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm22126-201ENSMUST00000083244 142 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ssu72Q9CY97 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Ssu72Q9CY97 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.98□□□□□ -1.61
Ssu72Q9CY97 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ssu72Q9CY97 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.98□□□□□ -1.61
Ssu72Q9CY97 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ssu72Q9CY97 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms