Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm25555-201ENSMUST00000158078 111 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm8600-201ENSMUST00000186320 905 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm7041-201ENSMUST00000201227 524 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm44294-201ENSMUST00000205090 728 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm6240-201ENSMUST00000208014 473 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm45162-201ENSMUST00000209013 618 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm18602-201ENSMUST00000209794 851 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Snora7a-201ENSMUST00000082629 140 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm24950-201ENSMUST00000082768 191 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm23447-201ENSMUST00000082798 163 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm25200-201ENSMUST00000083094 130 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm23971-201ENSMUST00000083317 191 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm23849-201ENSMUST00000083833 191 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm26316-201ENSMUST00000083886 191 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm12118-201ENSMUST00000119766 532 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm6079-201ENSMUST00000121356 404 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm11645-201ENSMUST00000121589 649 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm16471-201ENSMUST00000121940 618 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm23540-201ENSMUST00000157543 164 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm28594-201ENSMUST00000187022 661 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm37603-201ENSMUST00000192368 219 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm37431-201ENSMUST00000195102 111 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm17781-201ENSMUST00000195232 649 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm5552-201ENSMUST00000197149 515 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm18855-201ENSMUST00000206689 570 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm8745-201ENSMUST00000207846 782 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 AC126043.1-201ENSMUST00000221304 1141 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Olfr203-201ENSMUST00000089305 924 ntBASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Smc1aQ9CU62 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm25764-201ENSMUST00000104092 134 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm6429-201ENSMUST00000117144 475 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm13314-201ENSMUST00000118742 335 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm11982-201ENSMUST00000121480 314 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm15116-201ENSMUST00000122248 663 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm23084-201ENSMUST00000157850 114 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm25436-201ENSMUST00000158275 145 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm22840-201ENSMUST00000158444 136 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm23152-201ENSMUST00000175322 116 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm22108-201ENSMUST00000177961 106 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm22111-201ENSMUST00000178010 79 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm23687-201ENSMUST00000178664 79 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm24566-201ENSMUST00000179286 79 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm24798-201ENSMUST00000179334 106 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm23305-201ENSMUST00000179342 79 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm26389-201ENSMUST00000179819 79 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm22130-201ENSMUST00000179979 79 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm22393-201ENSMUST00000180153 79 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm25085-201ENSMUST00000180298 79 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm43601-201ENSMUST00000196294 945 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm42526-201ENSMUST00000198956 393 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms