Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Snord15a-201ENSMUST00000083888 148 ntBASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Krt88Q9CPR6 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm14142-201ENSMUST00000117833 296 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm15382-201ENSMUST00000118011 537 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm13567-201ENSMUST00000118026 247 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm14881-201ENSMUST00000120366 372 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm11982-201ENSMUST00000121480 314 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm14810-201ENSMUST00000121628 486 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm23505-201ENSMUST00000158989 130 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Mir1251-201ENSMUST00000175486 84 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm20162-201ENSMUST00000193629 871 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Mir129b-201ENSMUST00000197461 65 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm19244-201ENSMUST00000204340 253 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm3189-201ENSMUST00000205595 832 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm45778-201ENSMUST00000211959 153 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm34005-201ENSMUST00000215834 282 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Krt88Q9CPR6 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm24281-201ENSMUST00000104234 136 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm15108-201ENSMUST00000116160 803 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm11876-201ENSMUST00000120002 269 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm13973-201ENSMUST00000121371 894 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm15111-201ENSMUST00000122142 878 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm15116-201ENSMUST00000122248 663 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm22986-201ENSMUST00000122753 130 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm25185-201ENSMUST00000157754 96 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm23592-201ENSMUST00000157859 117 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm24961-201ENSMUST00000157918 184 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm23583-201ENSMUST00000158533 289 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm20542-201ENSMUST00000174582 372 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm20574-201ENSMUST00000182867 917 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm36934-201ENSMUST00000192007 306 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm17967-201ENSMUST00000195319 647 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm9379-201ENSMUST00000196790 646 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm44294-201ENSMUST00000205090 728 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm18602-201ENSMUST00000209794 851 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.18□□□□□ -1.9
Krt88Q9CPR6 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 159.8 ms