Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm37603-201ENSMUST00000192368 219 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm43659-201ENSMUST00000200894 628 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm44757-201ENSMUST00000206373 157 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm22304-201ENSMUST00000082688 129 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Mir30e-201ENSMUST00000083475 92 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Mir34b-201ENSMUST00000083558 84 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc28bQ8CEG5 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23319-201ENSMUST00000104467 131 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm15126-201ENSMUST00000118631 833 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm13228-201ENSMUST00000118937 634 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm13852-201ENSMUST00000122350 242 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14905-201ENSMUST00000122351 639 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm27964-201ENSMUST00000185195 62 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm29228-201ENSMUST00000185489 418 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm37167-201ENSMUST00000194946 396 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm43897-201ENSMUST00000204019 309 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm18850-201ENSMUST00000211578 388 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23518-201ENSMUST00000082835 153 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc28bQ8CEG5 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14512-201ENSMUST00000117924 230 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11566-201ENSMUST00000118550 203 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14687-201ENSMUST00000120206 363 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm13459-201ENSMUST00000121558 646 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11931-201ENSMUST00000121630 447 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11692-201ENSMUST00000122121 902 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm22219-201ENSMUST00000157562 319 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm17153-201ENSMUST00000171314 490 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm20397-201ENSMUST00000174520 362 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm36966-201ENSMUST00000192217 413 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm45727-201ENSMUST00000212886 572 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms