Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Nup88Q8CEC0 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.45□□□□□ -1.7
Nup88Q8CEC0 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.45□□□□□ -1.7
Nup88Q8CEC0 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Nup88Q8CEC0 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Nup88Q8CEC0 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Nup88Q8CEC0 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Nup88Q8CEC0 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm45263-201ENSMUST00000210377 1375 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm15783-201ENSMUST00000117521 633 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm15268-201ENSMUST00000118845 352 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm13194-201ENSMUST00000142299 311 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm24976-201ENSMUST00000158972 135 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm17061-201ENSMUST00000163167 499 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm8161-201ENSMUST00000168739 481 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm27964-201ENSMUST00000185195 62 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm28688-201ENSMUST00000187301 268 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm29460-201ENSMUST00000188607 714 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm17781-201ENSMUST00000195232 649 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm4859-201ENSMUST00000199625 787 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm6462-201ENSMUST00000081488 304 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm12667-201ENSMUST00000118299 1332 ntBASIC4.44□□□□□ -1.7
Nup88Q8CEC0 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm11566-201ENSMUST00000118550 203 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm12458-201ENSMUST00000119387 495 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm8757-201ENSMUST00000119660 372 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm26476-201ENSMUST00000122618 313 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm25557-201ENSMUST00000158084 315 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Mir6385-201ENSMUST00000184295 105 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm29320-201ENSMUST00000185235 615 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm29179-202ENSMUST00000186138 615 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm8600-201ENSMUST00000186320 905 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm29448-201ENSMUST00000186675 615 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm29314-201ENSMUST00000186800 615 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm28253-202ENSMUST00000187971 615 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm29169-201ENSMUST00000189835 615 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm38149-201ENSMUST00000191943 339 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm6240-201ENSMUST00000208014 473 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm9375-201ENSMUST00000208899 903 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 AC113305.1-201ENSMUST00000214664 724 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm7119-201ENSMUST00000221345 695 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm10704-201ENSMUST00000098952 730 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.43□□□□□ -1.7
Nup88Q8CEC0 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm14898-201ENSMUST00000120202 645 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm14577-201ENSMUST00000121134 256 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm14559-201ENSMUST00000121745 496 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm6058-201ENSMUST00000154261 399 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm25572-201ENSMUST00000157527 172 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Spin2g-201ENSMUST00000178425 687 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm28466-201ENSMUST00000190678 659 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm37603-201ENSMUST00000192368 219 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm9632-201ENSMUST00000195934 643 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Gm43493-201ENSMUST00000199837 202 ntBASIC4.42□□□□□ -1.7
Nup88Q8CEC0 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms