Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Gm7530-201ENSMUST00000218466 605 ntBASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Gm18704-201ENSMUST00000219736 446 ntBASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Gm17890-201ENSMUST00000221419 757 ntBASIC6.01□□□□□ -1.45
Usp40Q8BWR4 AC132315.1-201ENSMUST00000221771 390 ntBASIC6.01□□□□□ -1.45
Usp40Q8BWR4 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Gm38699-201ENSMUST00000221301 1740 ntBASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Usp40Q8BWR4 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Usp40Q8BWR4 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm44530-201ENSMUST00000207920 3559 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm38264-201ENSMUST00000194850 2032 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Mir297a-2-201ENSMUST00000103795 90 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm22656-201ENSMUST00000104199 171 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm14918-201ENSMUST00000118153 268 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm12878-201ENSMUST00000118744 332 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm8200-201ENSMUST00000122390 222 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm22986-201ENSMUST00000122753 130 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm23754-201ENSMUST00000157576 63 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm22076-201ENSMUST00000158601 84 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm15946-201ENSMUST00000160654 423 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm22621-201ENSMUST00000179678 74 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm27457-201ENSMUST00000184771 156 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm6057-201ENSMUST00000195927 314 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm44373-201ENSMUST00000196112 169 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm34005-201ENSMUST00000215834 282 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC6□□□□□ -1.45
Usp40Q8BWR4 AL606513.1-201ENSMUST00000225369 579 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 AC122448.1-201ENSMUST00000226317 772 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
Usp40Q8BWR4 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC6□□□□□ -1.45
Usp40Q8BWR4 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Usp40Q8BWR4 Gm42842-201ENSMUST00000197736 3004 ntBASIC6□□□□□ -1.45
Usp40Q8BWR4 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Usp40Q8BWR4 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Usp40Q8BWR4 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Usp40Q8BWR4 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm12900-201ENSMUST00000120919 573 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm13214-201ENSMUST00000122137 408 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm25386-201ENSMUST00000157814 288 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm27313-201ENSMUST00000183500 142 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Mir6907-201ENSMUST00000183764 71 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm29105-201ENSMUST00000187256 450 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm37966-201ENSMUST00000193122 326 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm8790-201ENSMUST00000194108 322 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm9227-201ENSMUST00000194733 566 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm18340-201ENSMUST00000196342 609 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm25793-201ENSMUST00000083287 107 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm26165-201ENSMUST00000083791 138 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm24490-201ENSMUST00000083803 98 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.99□□□□□ -1.45
Usp40Q8BWR4 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms