Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm16373-201ENSMUST00000129517 303 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm24059-201ENSMUST00000157493 312 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Mir7028-201ENSMUST00000185016 64 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm6947-201ENSMUST00000186254 78 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm36934-201ENSMUST00000192007 306 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Trbv28-201ENSMUST00000192804 264 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm44665-201ENSMUST00000205381 251 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm9375-201ENSMUST00000208899 903 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Mir27a-201ENSMUST00000083510 87 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Clrn3Q8BHH8 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm24671-201ENSMUST00000104159 158 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm15195-201ENSMUST00000118775 263 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm14570-201ENSMUST00000119444 391 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm14656-201ENSMUST00000120342 502 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm3835-201ENSMUST00000120752 403 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm14589-201ENSMUST00000121640 727 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm5392-201ENSMUST00000122189 789 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Snord92-201ENSMUST00000175548 85 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm44871-201ENSMUST00000207821 497 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm20039-201ENSMUST00000210329 394 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm45247-201ENSMUST00000210757 309 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 LOC667541-201ENSMUST00000223408 278 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.36□□□□□ -1.87
Clrn3Q8BHH8 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Gm12427-201ENSMUST00000117719 302 ntBASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Gm5731-201ENSMUST00000190969 481 ntBASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Gm5829-201ENSMUST00000191383 351 ntBASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Gm42438-201ENSMUST00000197832 974 ntBASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Gm43975-201ENSMUST00000203023 481 ntBASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Gm8231-201ENSMUST00000221617 783 ntBASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn3Q8BHH8 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Gm22676-201ENSMUST00000116972 129 ntBASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Gm14050-201ENSMUST00000117052 346 ntBASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Gm12543-201ENSMUST00000120410 543 ntBASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Gm11896-201ENSMUST00000121105 820 ntBASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Gm12001-201ENSMUST00000121727 913 ntBASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.34□□□□□ -1.87
Clrn3Q8BHH8 Gm25105-201ENSMUST00000122477 130 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms