Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm22625-201ENSMUST00000175382 126 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm22875-201ENSMUST00000175449 126 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm25197-201ENSMUST00000175516 126 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm27857-201ENSMUST00000176930 126 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm26268-201ENSMUST00000177685 126 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm23681-201ENSMUST00000178821 126 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm27236-201ENSMUST00000184147 442 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm6802-202ENSMUST00000186566 126 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm28489-201ENSMUST00000186655 316 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm9443-201ENSMUST00000188406 816 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm37550-201ENSMUST00000193230 463 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm44125-201ENSMUST00000203068 448 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm19131-201ENSMUST00000203408 789 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm5876-201ENSMUST00000203735 243 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm23733-201ENSMUST00000083750 106 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ubfd1Q78JW9 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Mir669o-201ENSMUST00000103898 96 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm14669-201ENSMUST00000118841 250 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm23789-201ENSMUST00000122536 301 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm24498-201ENSMUST00000158445 102 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm25451-201ENSMUST00000177832 121 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm26177-201ENSMUST00000178683 107 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm24897-201ENSMUST00000179033 107 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm27940-201ENSMUST00000184449 98 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm29484-201ENSMUST00000186067 324 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm37111-201ENSMUST00000193250 634 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm43710-201ENSMUST00000199583 452 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm18194-201ENSMUST00000210455 481 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 CT025603.4-201ENSMUST00000225777 413 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ubfd1Q78JW9 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ubfd1Q78JW9 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.35□□□□□ -1.71
Ubfd1Q78JW9 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ubfd1Q78JW9 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms