Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm24268-201ENSMUST00000082990 110 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm25792-201ENSMUST00000083289 100 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Mir298-201ENSMUST00000083476 82 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm25821-201ENSMUST00000093657 133 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.59□□□□□ -1.68
Rnf220Q6PDX6 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.59□□□□□ -1.68
Rnf220Q6PDX6 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Rnf220Q6PDX6 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Rnf220Q6PDX6 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Rnf220Q6PDX6 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Rnf220Q6PDX6 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm22592-201ENSMUST00000104242 131 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm14627-201ENSMUST00000118931 567 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm6797-201ENSMUST00000119440 512 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm11430-201ENSMUST00000121317 217 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm23171-201ENSMUST00000157159 264 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm24724-201ENSMUST00000158230 107 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm17081-201ENSMUST00000167363 478 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm21758-201ENSMUST00000179336 819 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm20832-201ENSMUST00000189076 665 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm28337-201ENSMUST00000190425 666 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm38046-201ENSMUST00000192733 550 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm31511-201ENSMUST00000193134 657 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm36866-201ENSMUST00000193343 657 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm36047-201ENSMUST00000193659 657 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm20857-201ENSMUST00000194766 657 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm20858-201ENSMUST00000195459 657 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm30638-201ENSMUST00000195570 656 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm36728-201ENSMUST00000195782 665 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm42830-201ENSMUST00000196642 313 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm5034-201ENSMUST00000199115 634 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm45588-201ENSMUST00000211213 630 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm45400-201ENSMUST00000211603 653 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Rnf220Q6PDX6 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm24350-201ENSMUST00000104163 133 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm12007-201ENSMUST00000120978 597 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm15428-201ENSMUST00000121352 333 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm22596-201ENSMUST00000157601 316 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm26172-201ENSMUST00000158421 134 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm22290-201ENSMUST00000177655 107 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm22583-201ENSMUST00000178031 107 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm23144-201ENSMUST00000180226 107 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Mir6417-201ENSMUST00000183815 116 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Mir6244-201ENSMUST00000184156 117 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms