Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm20574-201ENSMUST00000182867 917 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm27733-201ENSMUST00000184803 68 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Vsx2Q61412 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Vsx2Q61412 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm37097-201ENSMUST00000193676 336 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm43090-201ENSMUST00000202459 314 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm43039-201ENSMUST00000202883 963 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm35876-201ENSMUST00000205044 459 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm18921-201ENSMUST00000221798 366 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vsx2Q61412 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm5185-201ENSMUST00000080271 619 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Mir101b-201ENSMUST00000083622 97 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm25005-201ENSMUST00000083812 156 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm22864-201ENSMUST00000083950 130 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm10161-201ENSMUST00000091506 204 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm24987-201ENSMUST00000104453 134 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm12982-201ENSMUST00000117408 190 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm11905-201ENSMUST00000117653 678 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm6071-201ENSMUST00000119561 440 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm22792-201ENSMUST00000157225 133 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm23592-201ENSMUST00000157859 117 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm24314-201ENSMUST00000158274 123 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm5309-201ENSMUST00000197416 677 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm5983-201ENSMUST00000197739 770 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm31532-201ENSMUST00000203555 767 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm45420-201ENSMUST00000211243 425 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm39147-201ENSMUST00000211376 465 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Vsx2Q61412 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.28□□□□□ -1.88
Vsx2Q61412 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.28□□□□□ -1.88
Vsx2Q61412 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm5265-201ENSMUST00000076828 342 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm4987-201ENSMUST00000078326 408 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm22304-201ENSMUST00000082688 129 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Gm10212-201ENSMUST00000087884 324 ntBASIC3.28□□□□□ -1.88
Vsx2Q61412 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Vsx2Q61412 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Vsx2Q61412 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Vsx2Q61412 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.28□□□□□ -1.89
Vsx2Q61412 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Vsx2Q61412 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.89
Vsx2Q61412 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.28□□□□□ -1.89
Vsx2Q61412 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Vsx2Q61412 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Vsx2Q61412 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Vsx2Q61412 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Vsx2Q61412 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm15074-201ENSMUST00000117603 936 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm14771-201ENSMUST00000118249 203 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm11890-201ENSMUST00000119585 417 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm12998-201ENSMUST00000122445 789 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.27□□□□□ -1.89
Vsx2Q61412 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm22600-201ENSMUST00000157598 269 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm24965-201ENSMUST00000157922 106 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm8807-201ENSMUST00000179328 492 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Vsx2Q61412 Mir7658-201ENSMUST00000184043 57 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Mir6914-201ENSMUST00000184999 69 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm43308-201ENSMUST00000197236 373 ntBASIC3.27□□□□□ -1.89
Vsx2Q61412 Gm42621-201ENSMUST00000198114 275 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms