Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm22849-201ENSMUST00000157713 307 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm28141-201ENSMUST00000186676 342 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm28724-202ENSMUST00000194218 295 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm43974-201ENSMUST00000205080 684 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm30534-201ENSMUST00000217928 207 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm3123-201ENSMUST00000163480 480 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm17075-201ENSMUST00000171924 670 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm18558-201ENSMUST00000186253 1214 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm18692-201ENSMUST00000193047 511 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm18602-201ENSMUST00000209794 851 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 CT009754.4-201ENSMUST00000221430 565 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm18441-201ENSMUST00000223539 617 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm10242-201ENSMUST00000090064 330 ntBASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm26342-201ENSMUST00000104557 129 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm13064-201ENSMUST00000119125 557 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm12226-201ENSMUST00000144172 876 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm17187-201ENSMUST00000164622 410 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Mir7009-201ENSMUST00000184519 64 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm42578-201ENSMUST00000199960 194 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 AC123658.1-201ENSMUST00000228364 867 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.72□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm24780-201ENSMUST00000157635 143 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm26061-201ENSMUST00000175584 108 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm28781-201ENSMUST00000185760 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm28339-201ENSMUST00000185845 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm29574-201ENSMUST00000186226 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm28828-201ENSMUST00000186601 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm28967-201ENSMUST00000187351 281 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm29307-201ENSMUST00000187367 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm28896-201ENSMUST00000188609 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm29339-201ENSMUST00000189613 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm28159-201ENSMUST00000190296 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm29407-201ENSMUST00000191468 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm38107-201ENSMUST00000194873 696 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm44016-201ENSMUST00000203463 164 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm8423-201ENSMUST00000211387 607 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm18388-201ENSMUST00000222339 557 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm22361-201ENSMUST00000158435 176 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm28877-201ENSMUST00000191349 604 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm45513-201ENSMUST00000210228 376 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm22864-201ENSMUST00000083950 130 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.71□□□□□ -1.82
Ccdc88aQ5SNZ0 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm14987-201ENSMUST00000117820 676 ntBASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm13167-201ENSMUST00000118554 578 ntBASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm8747-201ENSMUST00000195392 751 ntBASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm14667-201ENSMUST00000119448 1350 ntBASIC3.7□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms