Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mir1946b-201ENSMUST00000157853 133 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm24546-201ENSMUST00000158652 102 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm6113-201ENSMUST00000180319 639 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm26585-201ENSMUST00000180890 630 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm7870-201ENSMUST00000184467 616 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm28628-201ENSMUST00000187006 264 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm28629-201ENSMUST00000187309 263 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm43070-201ENSMUST00000196938 415 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm43116-201ENSMUST00000199789 195 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm43849-201ENSMUST00000201086 215 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm7468-201ENSMUST00000203900 652 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm44903-201ENSMUST00000206840 130 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 AC110816.1-201ENSMUST00000218559 980 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Olfr815-201ENSMUST00000071557 951 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm23249-201ENSMUST00000083369 161 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Mir370-201ENSMUST00000083499 79 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm14579-201ENSMUST00000117068 283 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm15421-202ENSMUST00000118224 399 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm13852-201ENSMUST00000122350 242 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm4725-201ENSMUST00000151048 587 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Magea9-ps-202ENSMUST00000167328 899 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm7909-201ENSMUST00000182688 614 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm19257-201ENSMUST00000186121 183 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Ighv1-29-201ENSMUST00000194116 342 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Rnu3a-202ENSMUST00000196710 213 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm6051-201ENSMUST00000201529 352 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm43090-201ENSMUST00000202459 314 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm5339-201ENSMUST00000210551 1102 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm19134-201ENSMUST00000221203 487 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 AC192088.3-201ENSMUST00000227858 831 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm22970-201ENSMUST00000083304 186 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Mir423-201ENSMUST00000083584 109 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Olfr895-201ENSMUST00000093864 951 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 AC134860.3-201ENSMUST00000223564 1300 ntBASIC2.1□□□□□ -2.07
Trav3-1Q5R1I8 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm22658-201ENSMUST00000104196 155 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm14981-201ENSMUST00000117325 943 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm13533-201ENSMUST00000121104 177 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm23886-201ENSMUST00000122684 313 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm22453-201ENSMUST00000122801 318 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm24213-201ENSMUST00000158255 258 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm23409-201ENSMUST00000158516 237 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm19641-201ENSMUST00000188432 417 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm38030-201ENSMUST00000192376 475 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm37501-201ENSMUST00000192830 691 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm5983-201ENSMUST00000197739 770 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm44475-201ENSMUST00000204041 424 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 AC152415.1-201ENSMUST00000213320 440 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 AC127242.4-201ENSMUST00000221242 470 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms