Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm44615-201ENSMUST00000206548 358 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm45689-201ENSMUST00000210522 133 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm45778-201ENSMUST00000211959 153 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm2710-201ENSMUST00000073196 603 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm9432-201ENSMUST00000117810 759 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm2288-201ENSMUST00000118560 638 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm14119-201ENSMUST00000119511 235 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm26254-201ENSMUST00000122491 118 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm25058-201ENSMUST00000157365 128 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm22059-201ENSMUST00000157544 104 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm3123-201ENSMUST00000163480 480 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm22108-201ENSMUST00000177961 106 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm24798-201ENSMUST00000179334 106 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm27580-201ENSMUST00000183666 149 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm27648-201ENSMUST00000184315 107 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm44927-201ENSMUST00000207573 716 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim58Q5NCC9 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm43875-201ENSMUST00000203319 2475 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Mir147-201ENSMUST00000102354 79 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm20574-201ENSMUST00000182867 917 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm29281-201ENSMUST00000188077 381 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm37708-201ENSMUST00000192337 895 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm38280-201ENSMUST00000192610 158 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm17966-201ENSMUST00000193453 594 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm36382-201ENSMUST00000198892 541 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm3189-201ENSMUST00000205595 832 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm18597-201ENSMUST00000209519 694 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm18039-201ENSMUST00000217816 728 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Trim58Q5NCC9 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm13419-201ENSMUST00000121711 271 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm12001-201ENSMUST00000121727 913 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm24998-201ENSMUST00000157908 89 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm38080-201ENSMUST00000194035 268 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm44954-201ENSMUST00000208513 227 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm45245-201ENSMUST00000210082 376 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 AC153975.1-201ENSMUST00000220087 926 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms