Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm38098-201ENSMUST00000194115 241 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm43155-201ENSMUST00000202661 494 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm45063-201ENSMUST00000203726 472 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm45382-201ENSMUST00000210607 151 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm8423-201ENSMUST00000211387 607 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm31931-201ENSMUST00000219666 222 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 AC154626.1-201ENSMUST00000226070 311 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Olfr815-201ENSMUST00000071557 951 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm25131-201ENSMUST00000082653 151 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm24254-201ENSMUST00000083702 104 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm22350-201ENSMUST00000083924 156 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.59□□□□□ -1.84
Trim40Q3UWA4 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trim40Q3UWA4 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.59□□□□□ -1.84
Trim40Q3UWA4 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Trim40Q3UWA4 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.59□□□□□ -1.84
Trim40Q3UWA4 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trim40Q3UWA4 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Trim40Q3UWA4 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm24096-201ENSMUST00000103905 110 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mir1192-201ENSMUST00000116976 121 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm15076-201ENSMUST00000117076 474 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm6429-201ENSMUST00000117144 475 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm12328-201ENSMUST00000118611 197 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm14688-201ENSMUST00000119169 303 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm13511-201ENSMUST00000121167 363 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm6079-201ENSMUST00000121356 404 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm26476-201ENSMUST00000122618 313 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm25177-201ENSMUST00000122634 117 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm25665-201ENSMUST00000157695 110 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm3053-201ENSMUST00000161709 616 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm21756-201ENSMUST00000178380 930 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm21405-201ENSMUST00000179024 930 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28637-201ENSMUST00000179424 345 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm27828-201ENSMUST00000184108 119 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mir6391-201ENSMUST00000184391 104 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm27445-201ENSMUST00000184484 72 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28574-201ENSMUST00000185757 699 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28781-201ENSMUST00000185760 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28339-201ENSMUST00000185845 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29062-201ENSMUST00000186032 694 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29574-201ENSMUST00000186226 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm21191-201ENSMUST00000186484 930 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28828-201ENSMUST00000186601 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28057-201ENSMUST00000186603 615 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28255-201ENSMUST00000187101 694 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29307-201ENSMUST00000187367 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28397-201ENSMUST00000187970 699 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29640-201ENSMUST00000187972 278 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28896-201ENSMUST00000188609 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29545-201ENSMUST00000188878 694 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29339-201ENSMUST00000189613 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm21489-201ENSMUST00000189668 818 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm28159-201ENSMUST00000190296 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29366-201ENSMUST00000190481 699 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29503-201ENSMUST00000191044 930 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm5829-201ENSMUST00000191383 351 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm29407-201ENSMUST00000191468 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm37433-201ENSMUST00000192695 678 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm37441-201ENSMUST00000194430 678 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm38107-201ENSMUST00000194873 696 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm37431-201ENSMUST00000195102 111 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm37290-201ENSMUST00000195775 339 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms