Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm28655-201ENSMUST00000191538 692 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm17790-201ENSMUST00000191545 1228 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm5309-201ENSMUST00000197416 677 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm7407-201ENSMUST00000208301 568 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm45072-201ENSMUST00000208673 929 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm23058-201ENSMUST00000093703 107 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm23697-201ENSMUST00000103897 110 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm11598-201ENSMUST00000119257 357 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm5123-201ENSMUST00000121905 837 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm5755-201ENSMUST00000152394 837 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm4479-201ENSMUST00000178807 171 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm27733-201ENSMUST00000184803 68 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm5829-201ENSMUST00000191383 351 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm38088-201ENSMUST00000195829 241 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm5983-201ENSMUST00000197739 770 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.7□□□□□ -1.82
Upf3aQ3ULJ3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm25376-201ENSMUST00000104340 133 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm14622-201ENSMUST00000117117 468 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm7421-201ENSMUST00000119298 639 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm7365-201ENSMUST00000120877 639 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm14905-201ENSMUST00000122351 639 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm22956-201ENSMUST00000122520 80 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm16327-201ENSMUST00000137146 228 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm23123-201ENSMUST00000157648 144 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm24727-201ENSMUST00000158231 144 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm23028-201ENSMUST00000158773 265 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm27374-201ENSMUST00000183660 81 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm44343-201ENSMUST00000196702 90 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm43932-201ENSMUST00000204499 52 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm44600-201ENSMUST00000208540 111 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm7948-201ENSMUST00000212607 844 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.69□□□□□ -1.82
Upf3aQ3ULJ3 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.68□□□□□ -1.82
Upf3aQ3ULJ3 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.68□□□□□ -1.82
Upf3aQ3ULJ3 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Upf3aQ3ULJ3 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.68□□□□□ -1.82
Upf3aQ3ULJ3 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Upf3aQ3ULJ3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms