Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm26176-201ENSMUST00000083795 105 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm25764-201ENSMUST00000104092 134 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm15159-201ENSMUST00000117062 764 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm15148-201ENSMUST00000117602 156 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm13122-201ENSMUST00000118380 453 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm15613-201ENSMUST00000118396 326 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm11575-201ENSMUST00000122243 228 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm26028-201ENSMUST00000158660 294 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm22531-201ENSMUST00000158819 140 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm5527-201ENSMUST00000179821 642 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm3454-201ENSMUST00000185571 412 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm22897-201ENSMUST00000197860 128 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm7380-201ENSMUST00000211599 466 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm34005-201ENSMUST00000215834 282 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm6462-201ENSMUST00000081488 304 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm23975-201ENSMUST00000082685 106 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.59□□□□□ -1.83
Trafd1Q3UDK1 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.59□□□□□ -1.84
Trafd1Q3UDK1 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trafd1Q3UDK1 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Trafd1Q3UDK1 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.59□□□□□ -1.84
Trafd1Q3UDK1 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.59□□□□□ -1.84
Trafd1Q3UDK1 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.59□□□□□ -1.84
Trafd1Q3UDK1 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Trafd1Q3UDK1 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trafd1Q3UDK1 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm7421-201ENSMUST00000119298 639 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm7365-201ENSMUST00000120877 639 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm11829-201ENSMUST00000121003 282 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm13743-201ENSMUST00000121486 724 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm14768-201ENSMUST00000122126 678 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm25572-201ENSMUST00000157527 172 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm25438-201ENSMUST00000158281 110 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm23387-201ENSMUST00000158586 107 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm24553-201ENSMUST00000158653 131 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm5263-201ENSMUST00000163646 601 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Spin2g-201ENSMUST00000178425 687 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm27189-201ENSMUST00000184119 190 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm37239-201ENSMUST00000193510 141 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm17781-201ENSMUST00000195232 649 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm17935-201ENSMUST00000196649 772 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm21006-201ENSMUST00000196930 667 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm19243-201ENSMUST00000198592 269 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm6929-201ENSMUST00000210930 468 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm7530-201ENSMUST00000218466 605 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Snora7a-201ENSMUST00000082629 140 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms