Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm23000-201ENSMUST00000157083 139 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm25486-201ENSMUST00000158726 63 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm5058-201ENSMUST00000187331 463 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm18447-201ENSMUST00000187501 307 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm9696-202ENSMUST00000191541 830 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm42459-201ENSMUST00000199679 742 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm42665-201ENSMUST00000202100 586 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm9652-201ENSMUST00000209345 163 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Rnf40Q3U319 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 AC125223.1-203ENSMUST00000225304 498 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm25189-201ENSMUST00000083911 164 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rnf40Q3U319 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.18□□□□□ -1.42
Rnf40Q3U319 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm7853-201ENSMUST00000100708 478 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm11447-201ENSMUST00000118983 858 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm13818-201ENSMUST00000119441 511 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm13444-201ENSMUST00000119445 522 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm14119-201ENSMUST00000119511 235 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Rnf40Q3U319 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm13901-201ENSMUST00000137252 468 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm26354-201ENSMUST00000158221 129 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Scarna10-201ENSMUST00000158992 325 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm16545-201ENSMUST00000161968 463 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm22642-201ENSMUST00000175352 252 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm24168-201ENSMUST00000178825 107 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm5430-201ENSMUST00000182525 915 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm27853-201ENSMUST00000184176 250 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm28846-201ENSMUST00000189161 368 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm18453-201ENSMUST00000208000 626 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm45236-201ENSMUST00000208632 229 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm45296-201ENSMUST00000209625 205 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm8523-201ENSMUST00000211386 552 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm22300-201ENSMUST00000082661 126 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rnf40Q3U319 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rnf40Q3U319 Gm43871-201ENSMUST00000204931 1955 ntBASIC6.17□□□□□ -1.42
Rnf40Q3U319 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnf40Q3U319 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm25757-201ENSMUST00000103986 123 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm14142-201ENSMUST00000117833 296 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm12099-201ENSMUST00000118660 750 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm12174-201ENSMUST00000119853 813 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm11398-201ENSMUST00000120330 320 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm23463-201ENSMUST00000122468 99 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm22026-201ENSMUST00000122735 281 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm27926-201ENSMUST00000157180 66 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm22160-201ENSMUST00000158405 328 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm23197-201ENSMUST00000158809 112 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm21893-201ENSMUST00000179119 397 ntBASIC6.16□□□□□ -1.42
Rnf40Q3U319 Gm27465-201ENSMUST00000184290 91 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms