Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm26147-201ENSMUST00000104479 114 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm27896-201ENSMUST00000175162 317 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm23355-201ENSMUST00000177614 107 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm26337-201ENSMUST00000178000 79 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm23148-201ENSMUST00000180367 107 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm27970-201ENSMUST00000184854 407 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm37689-201ENSMUST00000193139 275 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm4045-201ENSMUST00000204076 310 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm44960-201ENSMUST00000207403 141 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm45273-201ENSMUST00000211559 281 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 n-R5s50-201ENSMUST00000083168 111 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm23502-201ENSMUST00000083902 145 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Mir708-201ENSMUST00000102189 109 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm15297-201ENSMUST00000117795 290 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm25392-201ENSMUST00000157335 297 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm22867-201ENSMUST00000157499 109 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm20542-201ENSMUST00000174582 372 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm25175-201ENSMUST00000178712 79 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm23922-201ENSMUST00000178792 79 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm24657-201ENSMUST00000180085 79 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm22996-201ENSMUST00000180236 79 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Mir6410-201ENSMUST00000184204 104 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm20056-201ENSMUST00000194813 519 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm37796-201ENSMUST00000195327 134 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm4321-201ENSMUST00000200520 442 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm44132-201ENSMUST00000205142 151 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 AC154358.1-201ENSMUST00000224871 218 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 AC168881.1-201ENSMUST00000226018 430 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.03□□□□□ -1.44
Col9a1Q05722 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col9a1Q05722 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col9a1Q05722 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col9a1Q05722 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.02□□□□□ -1.44
Col9a1Q05722 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Col9a1Q05722 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm4855-201ENSMUST00000192270 1967 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms