Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.28□□□□□ -1.72
CiitaP79621 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.28□□□□□ -1.72
CiitaP79621 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.28□□□□□ -1.72
CiitaP79621 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CiitaP79621 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CiitaP79621 Gm37001-201ENSMUST00000193377 190 ntBASIC4.28□□□□□ -1.72
CiitaP79621 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.28□□□□□ -1.72
CiitaP79621 Gm4248-201ENSMUST00000196905 316 ntBASIC4.28□□□□□ -1.72
CiitaP79621 Gm19726-201ENSMUST00000205008 240 ntBASIC4.28□□□□□ -1.72
CiitaP79621 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.28□□□□□ -1.72
CiitaP79621 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.28□□□□□ -1.72
CiitaP79621 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.28□□□□□ -1.72
CiitaP79621 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CiitaP79621 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CiitaP79621 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.28□□□□□ -1.72
CiitaP79621 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CiitaP79621 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CiitaP79621 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
CiitaP79621 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Gm23063-201ENSMUST00000102350 93 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm11393-201ENSMUST00000118019 288 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm7219-201ENSMUST00000119619 297 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm9001-201ENSMUST00000121642 399 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CiitaP79621 Gm16290-201ENSMUST00000161175 474 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CiitaP79621 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.27□□□□□ -1.73
CiitaP79621 Gm6625-201ENSMUST00000177870 272 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Gm10292-201ENSMUST00000183142 581 ntBASIC4.27□□□□□ -1.73
CiitaP79621 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CiitaP79621 Mir6401-201ENSMUST00000184499 109 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm29408-201ENSMUST00000187536 216 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.27□□□□□ -1.73
CiitaP79621 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm6929-201ENSMUST00000210930 468 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm19709-201ENSMUST00000215403 482 ntBASIC4.27□□□□□ -1.73
CiitaP79621 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm4052-201ENSMUST00000220890 451 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm3565-201ENSMUST00000222670 609 ntBASIC4.27□□□□□ -1.73
CiitaP79621 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.27□□□□□ -1.73
CiitaP79621 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CiitaP79621 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CiitaP79621 Gm24928-201ENSMUST00000083399 107 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Mir30e-201ENSMUST00000083475 92 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Gm25897-201ENSMUST00000083709 107 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CiitaP79621 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.27□□□□□ -1.73
CiitaP79621 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CiitaP79621 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CiitaP79621 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CiitaP79621 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CiitaP79621 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CiitaP79621 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CiitaP79621 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.26□□□□□ -1.73
CiitaP79621 Gm14586-201ENSMUST00000119571 408 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CiitaP79621 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CiitaP79621 Gm23754-201ENSMUST00000157576 63 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm23782-201ENSMUST00000157939 120 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm10357-201ENSMUST00000159886 264 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm19203-201ENSMUST00000174049 939 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm27718-201ENSMUST00000183721 86 ntBASIC4.26□□□□□ -1.73
CiitaP79621 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CiitaP79621 Gm28466-201ENSMUST00000190678 659 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm36964-201ENSMUST00000191876 198 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm42850-201ENSMUST00000202094 201 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm18268-201ENSMUST00000208445 943 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm45162-201ENSMUST00000209013 618 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Gm45539-201ENSMUST00000210313 428 ntBASIC4.26□□□□□ -1.73
CiitaP79621 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.26□□□□□ -1.73
CiitaP79621 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.26□□□□□ -1.73
CiitaP79621 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.26□□□□□ -1.73
CiitaP79621 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.26□□□□□ -1.73
CiitaP79621 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CiitaP79621 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CiitaP79621 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CiitaP79621 Gm24254-201ENSMUST00000083702 104 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CiitaP79621 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CiitaP79621 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.26□□□□□ -1.73
CiitaP79621 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CiitaP79621 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.25□□□□□ -1.73
CiitaP79621 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CiitaP79621 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms