Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cdx2P43241 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cdx2P43241 Gm13167-201ENSMUST00000118554 578 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Gm22988-201ENSMUST00000122759 144 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.2□□□□□ -1.9
Cdx2P43241 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.2□□□□□ -1.9
Cdx2P43241 Gm29281-201ENSMUST00000188077 381 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Gm20162-201ENSMUST00000193629 871 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Gm37288-201ENSMUST00000193963 334 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Mir1892-201ENSMUST00000197752 80 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Gm44869-201ENSMUST00000208836 357 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Gm35405-201ENSMUST00000218754 400 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Gm19181-201ENSMUST00000218891 940 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.2□□□□□ -1.9
Cdx2P43241 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Cdx2P43241 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Cdx2P43241 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Cdx2P43241 Gm23615-201ENSMUST00000082602 65 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Snora70-201ENSMUST00000083047 137 ntBASIC3.2□□□□□ -1.9
Cdx2P43241 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Cdx2P43241 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cdx2P43241 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cdx2P43241 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cdx2P43241 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cdx2P43241 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cdx2P43241 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cdx2P43241 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cdx2P43241 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cdx2P43241 Gm24119-201ENSMUST00000103979 246 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm15190-201ENSMUST00000120855 276 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm15780-201ENSMUST00000121283 935 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cdx2P43241 Gm22158-201ENSMUST00000158411 126 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm3123-201ENSMUST00000163480 480 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cdx2P43241 Snord92-201ENSMUST00000175548 85 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm24019-201ENSMUST00000178620 107 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm26243-201ENSMUST00000179260 107 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.19□□□□□ -1.9
Cdx2P43241 Gm28358-202ENSMUST00000189292 223 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm38330-201ENSMUST00000192743 959 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.19□□□□□ -1.9
Cdx2P43241 Gm43651-201ENSMUST00000199796 439 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm45513-201ENSMUST00000210228 376 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cdx2P43241 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cdx2P43241 Gm23296-201ENSMUST00000082555 107 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Gm24859-201ENSMUST00000082729 107 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cdx2P43241 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cdx2P43241 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Cdx2P43241 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.19□□□□□ -1.9
Cdx2P43241 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cdx2P43241 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdx2P43241 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Cdx2P43241 Gm13692-201ENSMUST00000120774 371 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm14768-201ENSMUST00000122126 678 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm15466-201ENSMUST00000122299 333 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm25966-201ENSMUST00000157169 117 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm22722-201ENSMUST00000157467 132 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm25669-201ENSMUST00000157699 112 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm22833-201ENSMUST00000158292 132 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm20672-201ENSMUST00000176605 261 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm27580-201ENSMUST00000183666 149 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.18□□□□□ -1.9
Cdx2P43241 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.18□□□□□ -1.9
Cdx2P43241 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.18□□□□□ -1.9
Cdx2P43241 Gm18540-201ENSMUST00000204025 526 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Cdx2P43241 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC3.18□□□□□ -1.9
Cdx2P43241 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.18□□□□□ -1.9
Cdx2P43241 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Cdx2P43241 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cdx2P43241 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.17□□□□□ -1.9
Cdx2P43241 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cdx2P43241 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Cdx2P43241 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.17□□□□□ -1.9
Cdx2P43241 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cdx2P43241 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cdx2P43241 Gm24068-201ENSMUST00000104513 132 ntBASIC3.17□□□□□ -1.9
Cdx2P43241 Gm11830-201ENSMUST00000120175 561 ntBASIC3.17□□□□□ -1.9
Cdx2P43241 Gm15142-201ENSMUST00000121013 856 ntBASIC3.17□□□□□ -1.9
Cdx2P43241 Gm14810-201ENSMUST00000121628 486 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms