Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm13064-201ENSMUST00000119125 557 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm11982-201ENSMUST00000121480 314 ntBASIC4.5□□□□□ -1.69
Traf1P39428 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Traf1P39428 Gm24960-201ENSMUST00000157923 90 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm16303-201ENSMUST00000161498 390 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm17204-201ENSMUST00000167936 478 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm17063-201ENSMUST00000168135 456 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm3851-201ENSMUST00000168653 318 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm27233-201ENSMUST00000184030 307 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm27733-201ENSMUST00000184803 68 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm27760-201ENSMUST00000185048 114 ntBASIC4.5□□□□□ -1.69
Traf1P39428 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.5□□□□□ -1.69
Traf1P39428 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC4.5□□□□□ -1.69
Traf1P39428 Gm9931-201ENSMUST00000193584 1185 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm44099-201ENSMUST00000203299 112 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.5□□□□□ -1.69
Traf1P39428 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.5□□□□□ -1.69
Traf1P39428 AC152979.4-201ENSMUST00000219893 379 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm3829-201ENSMUST00000222362 619 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Traf1P39428 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Traf1P39428 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Traf1P39428 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Traf1P39428 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Traf1P39428 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Traf1P39428 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Traf1P39428 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Traf1P39428 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Traf1P39428 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Traf1P39428 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Traf1P39428 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Traf1P39428 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Traf1P39428 Gm15193-201ENSMUST00000120224 865 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Gm12755-201ENSMUST00000122297 282 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Gm22480-201ENSMUST00000122568 128 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Gm26045-201ENSMUST00000157862 97 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.49□□□□□ -1.69
Traf1P39428 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Traf1P39428 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Traf1P39428 Gm20773-201ENSMUST00000178940 681 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Traf1P39428 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.49□□□□□ -1.69
Traf1P39428 Gm37343-201ENSMUST00000192542 111 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Gm37239-201ENSMUST00000193510 141 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Gm18540-201ENSMUST00000204025 526 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Gm44371-201ENSMUST00000204148 467 ntBASIC4.49□□□□□ -1.69
Traf1P39428 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.49□□□□□ -1.69
Traf1P39428 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.49□□□□□ -1.69
Traf1P39428 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.49□□□□□ -1.69
Traf1P39428 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.49□□□□□ -1.69
Traf1P39428 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.49□□□□□ -1.69
Traf1P39428 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Traf1P39428 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Traf1P39428 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Traf1P39428 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Traf1P39428 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Traf1P39428 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Traf1P39428 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Traf1P39428 Gm42701-201ENSMUST00000196117 1657 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Traf1P39428 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Traf1P39428 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm15159-201ENSMUST00000117062 764 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm12090-201ENSMUST00000118692 758 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm24930-201ENSMUST00000158315 83 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm6113-201ENSMUST00000180319 639 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Traf1P39428 Gm29704-201ENSMUST00000196011 253 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm42850-201ENSMUST00000202094 201 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm31520-201ENSMUST00000203048 733 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Gm8745-201ENSMUST00000207846 782 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm18602-201ENSMUST00000209794 851 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Gm45553-201ENSMUST00000209929 507 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.48□□□□□ -1.69
Traf1P39428 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.48□□□□□ -1.69
Traf1P39428 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.48□□□□□ -1.69
Traf1P39428 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms