Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
P20040 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.28□□□□□ -1.88
P20040 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.28□□□□□ -1.88
P20040 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
P20040 Gm10925-201ENSMUST00000189941 678 ntBASIC3.28□□□□□ -1.88
P20040 Gm43476-201ENSMUST00000197873 405 ntBASIC3.28□□□□□ -1.88
P20040 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.28□□□□□ -1.88
P20040 Gm44099-201ENSMUST00000203299 112 ntBASIC3.28□□□□□ -1.88
P20040 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.28□□□□□ -1.88
P20040 Gm44871-201ENSMUST00000207821 497 ntBASIC3.28□□□□□ -1.88
P20040 Gm21089-201ENSMUST00000215843 325 ntBASIC3.28□□□□□ -1.88
P20040 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.28□□□□□ -1.88
P20040 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.28□□□□□ -1.88
P20040 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.28□□□□□ -1.88
P20040 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.28□□□□□ -1.88
P20040 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.28□□□□□ -1.88
P20040 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.28□□□□□ -1.88
P20040 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.28□□□□□ -1.88
P20040 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
P20040 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
P20040 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
P20040 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
P20040 Mir30e-201ENSMUST00000083475 92 ntBASIC3.28□□□□□ -1.88
P20040 Mir132-201ENSMUST00000083603 66 ntBASIC3.28□□□□□ -1.88
P20040 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.28□□□□□ -1.88
P20040 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
P20040 Olfr713-201ENSMUST00000098139 975 ntBASIC3.28□□□□□ -1.88
P20040 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
P20040 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
P20040 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.89
P20040 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.27□□□□□ -1.89
P20040 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
P20040 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
P20040 Mir92b-201ENSMUST00000102300 83 ntBASIC3.27□□□□□ -1.89
P20040 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.27□□□□□ -1.89
P20040 Gm14890-201ENSMUST00000117660 676 ntBASIC3.27□□□□□ -1.89
P20040 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.27□□□□□ -1.89
P20040 Gm13650-201ENSMUST00000117729 433 ntBASIC3.27□□□□□ -1.89
P20040 Gm2288-201ENSMUST00000118560 638 ntBASIC3.27□□□□□ -1.89
P20040 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.27□□□□□ -1.89
P20040 Gm11982-201ENSMUST00000121480 314 ntBASIC3.27□□□□□ -1.89
P20040 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.27□□□□□ -1.89
P20040 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.27□□□□□ -1.89
P20040 Gm17030-201ENSMUST00000167016 393 ntBASIC3.27□□□□□ -1.89
P20040 Gm17204-201ENSMUST00000167936 478 ntBASIC3.27□□□□□ -1.89
P20040 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Gm4207-201ENSMUST00000173144 960 ntBASIC3.27□□□□□ -1.89
P20040 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.27□□□□□ -1.89
P20040 Gm6625-201ENSMUST00000177870 272 ntBASIC3.27□□□□□ -1.89
P20040 Gm18505-201ENSMUST00000187360 790 ntBASIC3.27□□□□□ -1.89
P20040 Gm29408-201ENSMUST00000187536 216 ntBASIC3.27□□□□□ -1.89
P20040 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 Gm5829-201ENSMUST00000191383 351 ntBASIC3.27□□□□□ -1.89
P20040 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.27□□□□□ -1.89
P20040 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.27□□□□□ -1.89
P20040 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Snora70-201ENSMUST00000083047 137 ntBASIC3.27□□□□□ -1.89
P20040 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
P20040 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
P20040 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
P20040 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
P20040 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.26□□□□□ -1.89
P20040 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
P20040 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
P20040 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
P20040 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
P20040 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.26□□□□□ -1.89
P20040 Gm22488-201ENSMUST00000116811 127 ntBASIC3.26□□□□□ -1.89
P20040 Gm11898-201ENSMUST00000117161 385 ntBASIC3.26□□□□□ -1.89
P20040 Gm13122-201ENSMUST00000118380 453 ntBASIC3.26□□□□□ -1.89
P20040 Gm14607-201ENSMUST00000119119 491 ntBASIC3.26□□□□□ -1.89
P20040 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.26□□□□□ -1.89
P20040 Gm6584-201ENSMUST00000119671 447 ntBASIC3.26□□□□□ -1.89
P20040 Gm14534-201ENSMUST00000120045 357 ntBASIC3.26□□□□□ -1.89
P20040 Gm12691-201ENSMUST00000120186 456 ntBASIC3.26□□□□□ -1.89
P20040 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.26□□□□□ -1.89
P20040 Gm12900-201ENSMUST00000120919 573 ntBASIC3.26□□□□□ -1.89
P20040 Gm15116-201ENSMUST00000122248 663 ntBASIC3.26□□□□□ -1.89
P20040 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.26□□□□□ -1.89
P20040 Gm22219-201ENSMUST00000157562 319 ntBASIC3.26□□□□□ -1.89
P20040 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.26□□□□□ -1.89
P20040 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.26□□□□□ -1.89
P20040 Gm28574-201ENSMUST00000185757 699 ntBASIC3.26□□□□□ -1.89
P20040 Gm28781-201ENSMUST00000185760 696 ntBASIC3.26□□□□□ -1.89
P20040 Gm28339-201ENSMUST00000185845 696 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms