Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm23523-201ENSMUST00000180190 107 ntBASIC5.59□□□□□ -1.51
RaraP11416 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RaraP11416 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.59□□□□□ -1.51
RaraP11416 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.59□□□□□ -1.51
RaraP11416 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.59□□□□□ -1.51
RaraP11416 Gm19418-201ENSMUST00000197436 580 ntBASIC5.59□□□□□ -1.51
RaraP11416 Gm42428-201ENSMUST00000198677 302 ntBASIC5.59□□□□□ -1.51
RaraP11416 Gm35648-201ENSMUST00000202304 475 ntBASIC5.59□□□□□ -1.51
RaraP11416 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.59□□□□□ -1.51
RaraP11416 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.59□□□□□ -1.51
RaraP11416 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.59□□□□□ -1.51
RaraP11416 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.59□□□□□ -1.51
RaraP11416 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.59□□□□□ -1.51
RaraP11416 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.59□□□□□ -1.51
RaraP11416 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.59□□□□□ -1.51
RaraP11416 Gm10038-201ENSMUST00000077233 441 ntBASIC5.59□□□□□ -1.51
RaraP11416 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.59□□□□□ -1.51
RaraP11416 Gm10222-201ENSMUST00000088336 294 ntBASIC5.59□□□□□ -1.51
RaraP11416 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.59□□□□□ -1.51
RaraP11416 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RaraP11416 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RaraP11416 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.59□□□□□ -1.51
RaraP11416 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.59□□□□□ -1.51
RaraP11416 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RaraP11416 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
RaraP11416 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.58□□□□□ -1.52
RaraP11416 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.58□□□□□ -1.52
RaraP11416 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Gm12422-201ENSMUST00000121431 302 ntBASIC5.58□□□□□ -1.52
RaraP11416 Gm27579-201ENSMUST00000158113 63 ntBASIC5.58□□□□□ -1.52
RaraP11416 Gm25907-201ENSMUST00000158486 125 ntBASIC5.58□□□□□ -1.52
RaraP11416 Gm25363-201ENSMUST00000158850 245 ntBASIC5.58□□□□□ -1.52
RaraP11416 Gm21999-201ENSMUST00000165985 387 ntBASIC5.58□□□□□ -1.52
RaraP11416 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RaraP11416 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RaraP11416 Gm22917-201ENSMUST00000180116 110 ntBASIC5.58□□□□□ -1.52
RaraP11416 Gm38131-201ENSMUST00000192449 430 ntBASIC5.58□□□□□ -1.52
RaraP11416 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.58□□□□□ -1.52
RaraP11416 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.58□□□□□ -1.52
RaraP11416 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.58□□□□□ -1.52
RaraP11416 Gm4321-201ENSMUST00000200520 442 ntBASIC5.58□□□□□ -1.52
RaraP11416 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
RaraP11416 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.58□□□□□ -1.52
RaraP11416 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.58□□□□□ -1.52
RaraP11416 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.58□□□□□ -1.52
RaraP11416 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.58□□□□□ -1.52
RaraP11416 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RaraP11416 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
RaraP11416 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
RaraP11416 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RaraP11416 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RaraP11416 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RaraP11416 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Mir711-201ENSMUST00000102188 82 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm24889-201ENSMUST00000104388 132 ntBASIC5.57□□□□□ -1.52
RaraP11416 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RaraP11416 Gm22468-201ENSMUST00000116680 120 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm26248-201ENSMUST00000116700 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm26137-201ENSMUST00000116701 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm26190-201ENSMUST00000116704 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm24617-201ENSMUST00000116705 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm25778-201ENSMUST00000116713 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm25774-201ENSMUST00000116717 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm22102-201ENSMUST00000116730 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm23177-201ENSMUST00000116784 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm24193-201ENSMUST00000116801 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm24744-201ENSMUST00000116833 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm24427-201ENSMUST00000116896 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm22346-201ENSMUST00000116918 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm23606-201ENSMUST00000116938 121 ntBASIC5.57□□□□□ -1.52
RaraP11416 Gm22029-201ENSMUST00000116940 121 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms