Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm44650-201ENSMUST00000206929 194 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.01□□□□□ -1.77
Lire1P11260 Gm3338-201ENSMUST00000220982 269 ntBASIC4.01□□□□□ -1.77
Lire1P11260 AC131068.1-201ENSMUST00000226891 482 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Lire1P11260 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Lire1P11260 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Lire1P11260 Mir202-201ENSMUST00000083568 72 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Lire1P11260 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Lire1P11260 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Lire1P11260 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Lire1P11260 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4□□□□□ -1.77
Lire1P11260 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lire1P11260 Gm12852-201ENSMUST00000119478 719 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm12543-201ENSMUST00000120410 543 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm13574-201ENSMUST00000120482 394 ntBASIC4□□□□□ -1.77
Lire1P11260 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4□□□□□ -1.77
Lire1P11260 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Gm17117-201ENSMUST00000163665 299 ntBASIC4□□□□□ -1.77
Lire1P11260 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4□□□□□ -1.77
Lire1P11260 Gm6214-201ENSMUST00000178845 541 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm22367-201ENSMUST00000178930 132 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm27760-201ENSMUST00000185048 114 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm28190-201ENSMUST00000189766 722 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4□□□□□ -1.77
Lire1P11260 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm35931-201ENSMUST00000203931 448 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm45499-201ENSMUST00000211656 280 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm7751-201ENSMUST00000212868 709 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm19137-201ENSMUST00000213790 1164 ntBASIC4□□□□□ -1.77
Lire1P11260 AC161054.1-201ENSMUST00000214319 184 ntBASIC4□□□□□ -1.77
Lire1P11260 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC4□□□□□ -1.77
Lire1P11260 AC154576.1-201ENSMUST00000225864 563 ntBASIC4□□□□□ -1.77
Lire1P11260 AC156790.5-201ENSMUST00000227075 231 ntBASIC4□□□□□ -1.77
Lire1P11260 AC154692.1-201ENSMUST00000228314 544 ntBASIC4□□□□□ -1.77
Lire1P11260 AC164437.2-201ENSMUST00000228915 797 ntBASIC4□□□□□ -1.77
Lire1P11260 AC098719.1-201ENSMUST00000228920 371 ntBASIC4□□□□□ -1.77
Lire1P11260 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Snora31-201ENSMUST00000083213 130 ntBASIC4□□□□□ -1.77
Lire1P11260 Gm42483-201ENSMUST00000197556 1742 ntBASIC4□□□□□ -1.77
Lire1P11260 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Lire1P11260 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lire1P11260 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lire1P11260 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.99□□□□□ -1.77
Lire1P11260 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lire1P11260 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Lire1P11260 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lire1P11260 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lire1P11260 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.99□□□□□ -1.77
Lire1P11260 Gm16545-201ENSMUST00000161968 463 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lire1P11260 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lire1P11260 Gm11394-201ENSMUST00000181421 517 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lire1P11260 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lire1P11260 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.99□□□□□ -1.77
Lire1P11260 Gm30280-201ENSMUST00000192214 262 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.99□□□□□ -1.77
Lire1P11260 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.99□□□□□ -1.77
Lire1P11260 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Lire1P11260 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.99□□□□□ -1.77
Lire1P11260 Gm45434-201ENSMUST00000210550 293 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.99□□□□□ -1.77
Lire1P11260 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.99□□□□□ -1.77
Lire1P11260 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lire1P11260 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lire1P11260 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Lire1P11260 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.99□□□□□ -1.77
Lire1P11260 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Lire1P11260 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Lire1P11260 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.98□□□□□ -1.77
Lire1P11260 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Lire1P11260 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.98□□□□□ -1.77
Lire1P11260 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Lire1P11260 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Lire1P11260 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Lire1P11260 Gm13973-201ENSMUST00000121371 894 ntBASIC3.98□□□□□ -1.77
Lire1P11260 Gm15263-201ENSMUST00000121556 642 ntBASIC3.98□□□□□ -1.77
Lire1P11260 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Lire1P11260 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Lire1P11260 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC3.98□□□□□ -1.77
Lire1P11260 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.98□□□□□ -1.77
Lire1P11260 Gm22776-201ENSMUST00000178634 94 ntBASIC3.98□□□□□ -1.77
Lire1P11260 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Lire1P11260 Gm23767-201ENSMUST00000179278 94 ntBASIC3.98□□□□□ -1.77
Lire1P11260 Gm26866-201ENSMUST00000180414 802 ntBASIC3.98□□□□□ -1.77
Lire1P11260 Gm27522-201ENSMUST00000183949 230 ntBASIC3.98□□□□□ -1.77
Lire1P11260 Gm37881-201ENSMUST00000193001 421 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms