Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Gm43894-201ENSMUST00000203274 688 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Gm45078-201ENSMUST00000205343 546 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.8□□□□□ -1.8
Chmp6P0C0A3 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.8□□□□□ -1.8
Chmp6P0C0A3 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.8□□□□□ -1.8
Chmp6P0C0A3 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Chmp6P0C0A3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm25764-201ENSMUST00000104092 134 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm5762-201ENSMUST00000119204 258 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm11387-201ENSMUST00000120266 772 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm23755-201ENSMUST00000157578 343 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm26045-201ENSMUST00000157862 97 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm22108-201ENSMUST00000177961 106 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm24798-201ENSMUST00000179334 106 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm42832-201ENSMUST00000196361 745 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm44665-201ENSMUST00000205381 251 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm45245-201ENSMUST00000210082 376 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm45247-201ENSMUST00000210757 309 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm23925-201ENSMUST00000082471 132 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm26176-201ENSMUST00000083795 105 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Chmp6P0C0A3 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm11913-201ENSMUST00000119094 336 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm15014-201ENSMUST00000120742 258 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm16331-201ENSMUST00000144274 498 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm26141-201ENSMUST00000175299 126 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm27580-201ENSMUST00000183666 149 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm27733-201ENSMUST00000184803 68 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm2189-201ENSMUST00000201419 429 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm7726-201ENSMUST00000206241 231 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm23058-201ENSMUST00000093703 107 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.78□□□□□ -1.8
Chmp6P0C0A3 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Gm25667-201ENSMUST00000157701 275 ntBASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Gm24854-201ENSMUST00000158025 98 ntBASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Gm16101-201ENSMUST00000160695 430 ntBASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.77□□□□□ -1.81
Chmp6P0C0A3 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Gm26933-201ENSMUST00000182320 827 ntBASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Gm27535-201ENSMUST00000183814 157 ntBASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Chmp6P0C0A3 Gm3454-201ENSMUST00000185571 412 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms