Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC125523.1-201ENSMUST00000228018 934 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col3a1P08121 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm23297-201ENSMUST00000083184 127 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Col3a1P08121 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col3a1P08121 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.34□□□□□ -1.72
Col3a1P08121 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Col3a1P08121 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Col3a1P08121 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Col3a1P08121 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col3a1P08121 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col3a1P08121 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col3a1P08121 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col3a1P08121 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC4.33□□□□□ -1.72
Col3a1P08121 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col3a1P08121 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col3a1P08121 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col3a1P08121 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.33□□□□□ -1.72
Col3a1P08121 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.33□□□□□ -1.72
Col3a1P08121 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col3a1P08121 Gm24190-201ENSMUST00000157976 216 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.33□□□□□ -1.72
Col3a1P08121 Gm44370-201ENSMUST00000175436 112 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Gm27864-201ENSMUST00000183704 190 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Gm28113-201ENSMUST00000188280 229 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Gm37575-201ENSMUST00000195467 309 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col3a1P08121 Gm31520-201ENSMUST00000203048 733 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col3a1P08121 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col3a1P08121 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col3a1P08121 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col3a1P08121 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col3a1P08121 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col3a1P08121 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col3a1P08121 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col3a1P08121 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Col3a1P08121 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Col3a1P08121 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.33□□□□□ -1.72
Col3a1P08121 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col3a1P08121 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Col3a1P08121 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col3a1P08121 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col3a1P08121 Gm14751-201ENSMUST00000117693 222 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Gm12902-201ENSMUST00000118389 322 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Col3a1P08121 Gm22034-201ENSMUST00000157283 134 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Gm24962-201ENSMUST00000157917 109 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Gm17377-201ENSMUST00000165184 207 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Gm28390-201ENSMUST00000185212 700 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col3a1P08121 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.32□□□□□ -1.72
Col3a1P08121 Gm7142-201ENSMUST00000194232 586 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Gm18445-201ENSMUST00000195502 774 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col3a1P08121 AC156795.1-201ENSMUST00000214655 414 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col3a1P08121 Gm45965-201ENSMUST00000221192 1284 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col3a1P08121 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col3a1P08121 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col3a1P08121 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col3a1P08121 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.32□□□□□ -1.72
Col3a1P08121 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col3a1P08121 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.32□□□□□ -1.72
Col3a1P08121 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.32□□□□□ -1.72
Col3a1P08121 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col3a1P08121 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm24374-201ENSMUST00000104394 106 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm12225-201ENSMUST00000117995 298 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm2318-201ENSMUST00000119623 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm14837-201ENSMUST00000119688 206 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm24211-201ENSMUST00000158264 107 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm23775-201ENSMUST00000158991 249 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col3a1P08121 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm7438-201ENSMUST00000177664 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm7408-201ENSMUST00000178014 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm7386-201ENSMUST00000178020 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC4.31□□□□□ -1.72
Col3a1P08121 Gm3657-201ENSMUST00000178170 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm7415-201ENSMUST00000178205 639 ntBASIC4.31□□□□□ -1.72
Col3a1P08121 Gm7398-201ENSMUST00000178589 639 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms