Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.44□□□□□ -1.54
Vti1aO89116 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Vti1aO89116 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Vti1aO89116 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.44□□□□□ -1.54
Vti1aO89116 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Vti1aO89116 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Vti1aO89116 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Vti1aO89116 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Vti1aO89116 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Vti1aO89116 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm13331-201ENSMUST00000117500 448 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm12578-201ENSMUST00000121244 417 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm14784-201ENSMUST00000121604 663 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.43□□□□□ -1.54
Vti1aO89116 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.43□□□□□ -1.54
Vti1aO89116 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Vti1aO89116 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm20773-201ENSMUST00000178940 681 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vti1aO89116 Mir6382-201ENSMUST00000184055 110 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Mir6943-201ENSMUST00000185186 66 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm28390-201ENSMUST00000185212 700 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm37030-201ENSMUST00000194254 295 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm37659-201ENSMUST00000194574 111 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm38008-201ENSMUST00000195333 518 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm18482-201ENSMUST00000202405 760 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.43□□□□□ -1.54
Vti1aO89116 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Vti1aO89116 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.43□□□□□ -1.54
Vti1aO89116 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vti1aO89116 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vti1aO89116 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Olfr203-201ENSMUST00000089305 924 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Vti1aO89116 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.43□□□□□ -1.54
Vti1aO89116 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vti1aO89116 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Vti1aO89116 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vti1aO89116 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm24469-201ENSMUST00000104487 131 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm15772-201ENSMUST00000118533 438 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm12564-201ENSMUST00000119860 321 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm22208-201ENSMUST00000122658 110 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm15905-201ENSMUST00000137042 298 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm25907-201ENSMUST00000158486 125 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm27688-201ENSMUST00000183634 91 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm43825-201ENSMUST00000199650 734 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm19219-201ENSMUST00000215863 724 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm5750-201ENSMUST00000218711 801 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm2446-201ENSMUST00000220144 772 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 AV026068-237ENSMUST00000226075 572 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vti1aO89116 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm25079-201ENSMUST00000082529 203 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Gm22508-201ENSMUST00000082772 110 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vti1aO89116 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vti1aO89116 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vti1aO89116 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms