Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm28639-201ENSMUST00000191519 481 ntBASIC2.58□□□□□ -2
SncaO55042 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.58□□□□□ -2
SncaO55042 Gm43441-201ENSMUST00000201458 205 ntBASIC2.58□□□□□ -2
SncaO55042 Gm43975-201ENSMUST00000203023 481 ntBASIC2.58□□□□□ -2
SncaO55042 Gm45080-201ENSMUST00000206648 283 ntBASIC2.58□□□□□ -2
SncaO55042 Gm34779-201ENSMUST00000210036 263 ntBASIC2.58□□□□□ -2
SncaO55042 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.58□□□□□ -2
SncaO55042 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.58□□□□□ -2
SncaO55042 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.58□□□□□ -2
SncaO55042 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.58□□□□□ -2
SncaO55042 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.58□□□□□ -2
SncaO55042 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SncaO55042 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.58□□□□□ -2
SncaO55042 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.58□□□□□ -2
SncaO55042 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.58□□□□□ -2
SncaO55042 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SncaO55042 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.57□□□□□ -2
SncaO55042 Gm24096-201ENSMUST00000103905 110 ntBASIC2.57□□□□□ -2
SncaO55042 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.57□□□□□ -2
SncaO55042 Gm14971-201ENSMUST00000117980 663 ntBASIC2.57□□□□□ -2
SncaO55042 Gm13064-201ENSMUST00000119125 557 ntBASIC2.57□□□□□ -2
SncaO55042 Gm13717-201ENSMUST00000119868 365 ntBASIC2.57□□□□□ -2
SncaO55042 Gm15244-201ENSMUST00000121122 130 ntBASIC2.57□□□□□ -2
SncaO55042 Gm6762-201ENSMUST00000121769 289 ntBASIC2.57□□□□□ -2
SncaO55042 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC2.57□□□□□ -2
SncaO55042 Gm22320-201ENSMUST00000157149 312 ntBASIC2.57□□□□□ -2
SncaO55042 Gm24914-201ENSMUST00000157285 313 ntBASIC2.57□□□□□ -2
SncaO55042 Gm22722-201ENSMUST00000157467 132 ntBASIC2.57□□□□□ -2
SncaO55042 Gm22833-201ENSMUST00000158292 132 ntBASIC2.57□□□□□ -2
SncaO55042 Gm16026-202ENSMUST00000159695 772 ntBASIC2.57□□□□□ -2
SncaO55042 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SncaO55042 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.57□□□□□ -2
SncaO55042 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.57□□□□□ -2
SncaO55042 Gm27308-201ENSMUST00000184807 233 ntBASIC2.57□□□□□ -2
SncaO55042 Gm29602-201ENSMUST00000186887 442 ntBASIC2.57□□□□□ -2
SncaO55042 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.57□□□□□ -2
SncaO55042 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC2.57□□□□□ -2
SncaO55042 Gm18660-201ENSMUST00000199542 629 ntBASIC2.57□□□□□ -2
SncaO55042 Gm18597-201ENSMUST00000209519 694 ntBASIC2.57□□□□□ -2
SncaO55042 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.57□□□□□ -2
SncaO55042 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.57□□□□□ -2
SncaO55042 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.57□□□□□ -2
SncaO55042 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
SncaO55042 Gm7204-201ENSMUST00000062591 600 ntBASIC2.57□□□□□ -2
SncaO55042 Gm22245-201ENSMUST00000082479 103 ntBASIC2.57□□□□□ -2
SncaO55042 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.57□□□□□ -2
SncaO55042 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SncaO55042 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
SncaO55042 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.56□□□□□ -2
SncaO55042 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SncaO55042 Gm24273-201ENSMUST00000102332 164 ntBASIC2.56□□□□□ -2
SncaO55042 Gm24581-201ENSMUST00000103962 133 ntBASIC2.56□□□□□ -2
SncaO55042 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC2.56□□□□□ -2
SncaO55042 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC2.56□□□□□ -2
SncaO55042 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC2.56□□□□□ -2
SncaO55042 Gm22036-201ENSMUST00000157279 215 ntBASIC2.56□□□□□ -2
SncaO55042 Gm23234-201ENSMUST00000157304 134 ntBASIC2.56□□□□□ -2
SncaO55042 Mir1934-201ENSMUST00000158127 83 ntBASIC2.56□□□□□ -2
SncaO55042 Gm24213-201ENSMUST00000158255 258 ntBASIC2.56□□□□□ -2
SncaO55042 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC2.56□□□□□ -2
SncaO55042 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC2.56□□□□□ -2
SncaO55042 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.56□□□□□ -2
SncaO55042 Mir6398-201ENSMUST00000184541 102 ntBASIC2.56□□□□□ -2
SncaO55042 Gm28390-201ENSMUST00000185212 700 ntBASIC2.56□□□□□ -2
SncaO55042 Scgb2b6-201ENSMUST00000188132 330 ntBASIC2.56□□□□□ -2
SncaO55042 Gm32447-201ENSMUST00000194265 697 ntBASIC2.56□□□□□ -2
SncaO55042 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.56□□□□□ -2
SncaO55042 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.56□□□□□ -2
SncaO55042 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.56□□□□□ -2
SncaO55042 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.56□□□□□ -2
SncaO55042 Gm7786-201ENSMUST00000210494 436 ntBASIC2.56□□□□□ -2
SncaO55042 Gm45690-201ENSMUST00000210775 246 ntBASIC2.56□□□□□ -2
SncaO55042 Gm7034-201ENSMUST00000218638 645 ntBASIC2.56□□□□□ -2
SncaO55042 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.56□□□□□ -2
SncaO55042 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.56□□□□□ -2
SncaO55042 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.56□□□□□ -2
SncaO55042 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC2.56□□□□□ -2
SncaO55042 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
SncaO55042 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SncaO55042 Gm23736-201ENSMUST00000082553 75 ntBASIC2.56□□□□□ -2
SncaO55042 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.56□□□□□ -2
SncaO55042 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.56□□□□□ -2
SncaO55042 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SncaO55042 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.56□□□□□ -2
SncaO55042 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
SncaO55042 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.56□□□□□ -2
SncaO55042 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.56□□□□□ -2
SncaO55042 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.56□□□□□ -2
SncaO55042 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.56□□□□□ -2
SncaO55042 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
SncaO55042 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SncaO55042 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.55□□□□□ -2
SncaO55042 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.55□□□□□ -2
SncaO55042 Gm14776-201ENSMUST00000121029 887 ntBASIC2.55□□□□□ -2
SncaO55042 Gm14977-201ENSMUST00000121626 812 ntBASIC2.55□□□□□ -2
SncaO55042 Gm26477-201ENSMUST00000122617 323 ntBASIC2.55□□□□□ -2
SncaO55042 Gm25807-201ENSMUST00000122783 305 ntBASIC2.55□□□□□ -2
SncaO55042 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.55□□□□□ -2
SncaO55042 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.55□□□□□ -2
SncaO55042 Gm25150-201ENSMUST00000157121 60 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms