Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm15951-201ENSMUST00000118377 400 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm13574-201ENSMUST00000120482 394 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm23228-201ENSMUST00000157296 270 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm10075-201ENSMUST00000162030 545 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Hmgb3O54879 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm28002-201ENSMUST00000184832 100 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm37164-201ENSMUST00000192809 637 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm37209-201ENSMUST00000194109 1276 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm19418-201ENSMUST00000197436 580 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm45209-201ENSMUST00000207122 353 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm45796-201ENSMUST00000212483 114 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm18507-201ENSMUST00000218855 525 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Hmgb3O54879 AC131117.2-203ENSMUST00000225886 950 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Hmgb3O54879 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.67□□□□□ -1.98
Hmgb3O54879 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Hmgb3O54879 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Hmgb3O54879 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm42888-201ENSMUST00000202425 4361 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Hmgb3O54879 Mir693-201ENSMUST00000102187 89 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm22269-201ENSMUST00000104002 130 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm12782-201ENSMUST00000117519 727 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm12230-201ENSMUST00000118301 454 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm11704-201ENSMUST00000120031 214 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm23775-201ENSMUST00000158991 249 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Hmgb3O54879 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Hmgb3O54879 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Hmgb3O54879 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm21139-201ENSMUST00000186594 877 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.66□□□□□ -1.98
Hmgb3O54879 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm29525-201ENSMUST00000189844 699 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Ighv10-4-201ENSMUST00000193702 299 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm44952-201ENSMUST00000204443 433 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm44092-201ENSMUST00000204470 258 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm20074-201ENSMUST00000208144 484 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 AC153852.1-201ENSMUST00000217881 567 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm43883-201ENSMUST00000204002 3750 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Hmgb3O54879 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.66□□□□□ -1.98
Hmgb3O54879 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Hmgb3O54879 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Hmgb3O54879 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Hmgb3O54879 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm23271-201ENSMUST00000104052 124 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm24671-201ENSMUST00000104159 158 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm9119-201ENSMUST00000118866 495 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm15854-201ENSMUST00000118879 808 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm8260-201ENSMUST00000119230 353 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm4852-201ENSMUST00000121202 729 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm11385-201ENSMUST00000121513 570 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm22816-201ENSMUST00000157450 117 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm22310-201ENSMUST00000157509 116 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm23112-201ENSMUST00000158606 125 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC2.65□□□□□ -1.99
Hmgb3O54879 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm24819-201ENSMUST00000175094 166 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm20701-201ENSMUST00000176082 347 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm20612-201ENSMUST00000176318 236 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm19774-201ENSMUST00000190667 114 ntBASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.65□□□□□ -1.99
Hmgb3O54879 Gm37791-201ENSMUST00000195081 286 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms