Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm6056-201ENSMUST00000221253 488 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm26111-201ENSMUST00000083969 106 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm8995-201ENSMUST00000184842 7280 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.05□□□□□ -1.6
Trim55G3X8Y1 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm13451-201ENSMUST00000117649 592 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm12379-201ENSMUST00000119607 391 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm12482-201ENSMUST00000120435 630 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm15212-201ENSMUST00000122403 466 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm23171-201ENSMUST00000157159 264 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm22434-201ENSMUST00000158549 122 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm4076-201ENSMUST00000179230 965 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm21638-201ENSMUST00000179473 836 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm25156-201ENSMUST00000179809 79 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm2325-201ENSMUST00000186637 581 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm9569-201ENSMUST00000187492 787 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm43035-201ENSMUST00000197626 517 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm19219-201ENSMUST00000215863 724 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 AC116460.1-201ENSMUST00000219040 313 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm18120-201ENSMUST00000220079 511 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm8231-201ENSMUST00000221617 783 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.04□□□□□ -1.6
Trim55G3X8Y1 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim55G3X8Y1 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim55G3X8Y1 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim55G3X8Y1 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Trim55G3X8Y1 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Trim55G3X8Y1 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Trim55G3X8Y1 Mir667-201ENSMUST00000102441 92 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms