Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm7855-201ENSMUST00000137737 687 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm24734-201ENSMUST00000158860 262 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm18871-201ENSMUST00000218655 745 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm23615-201ENSMUST00000082602 65 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm22423-201ENSMUST00000082861 184 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Gm25581-201ENSMUST00000083410 164 ntBASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Scn3aA2ASI5 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Gm43826-201ENSMUST00000199604 2612 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Gm28002-201ENSMUST00000184832 100 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Gm43930-201ENSMUST00000203868 845 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.53□□□□□ -1.84
Scn3aA2ASI5 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Scn3aA2ASI5 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm24930-201ENSMUST00000158315 83 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm20574-201ENSMUST00000182867 917 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm37293-201ENSMUST00000191658 295 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm12788-201ENSMUST00000119090 308 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm15466-201ENSMUST00000122299 333 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm44559-201ENSMUST00000207177 1012 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm24817-201ENSMUST00000093672 105 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.52□□□□□ -1.85
Scn3aA2ASI5 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm24534-201ENSMUST00000157949 291 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm18900-201ENSMUST00000193218 584 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm7142-201ENSMUST00000194232 586 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm21006-201ENSMUST00000196930 667 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm44431-201ENSMUST00000203500 413 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Snord14e-201ENSMUST00000082857 90 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm26121-201ENSMUST00000083364 162 ntBASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Scn3aA2ASI5 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm12739-201ENSMUST00000119769 382 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm22730-201ENSMUST00000158085 171 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm4761-201ENSMUST00000178086 582 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm20162-201ENSMUST00000193629 871 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Gm2142-201ENSMUST00000197899 589 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.5□□□□□ -1.85
Scn3aA2ASI5 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms