Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.3□□□□□ -1.88
Scn1aA2APX8 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.3□□□□□ -1.88
Scn1aA2APX8 Gm22971-201ENSMUST00000083305 97 ntBASIC3.3□□□□□ -1.88
Scn1aA2APX8 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn1aA2APX8 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm23380-201ENSMUST00000158448 103 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm26866-201ENSMUST00000180414 802 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm44232-201ENSMUST00000204537 225 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1aA2APX8 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm12731-201ENSMUST00000120932 268 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm14957-201ENSMUST00000121069 817 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm26371-201ENSMUST00000157829 104 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm4761-201ENSMUST00000178086 582 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm28060-201ENSMUST00000191554 189 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Gm21006-201ENSMUST00000196930 667 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn1aA2APX8 Snord21-201ENSMUST00000082519 94 ntBASIC3.29□□□□□ -1.88
Scn1aA2APX8 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm9427-201ENSMUST00000116187 651 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm14786-201ENSMUST00000117127 944 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm3757-201ENSMUST00000125878 675 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm24190-201ENSMUST00000157976 216 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm25490-201ENSMUST00000158734 130 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm20651-201ENSMUST00000177219 329 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm24350-202ENSMUST00000198309 132 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm43922-201ENSMUST00000205071 328 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Scn1aA2APX8 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Gm23623-201ENSMUST00000082461 107 ntBASIC3.28□□□□□ -1.88
Scn1aA2APX8 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Scn1aA2APX8 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Scn1aA2APX8 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm22939-201ENSMUST00000103958 131 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm7308-201ENSMUST00000121087 447 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm22187-201ENSMUST00000157819 129 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm26933-201ENSMUST00000182320 827 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm36382-201ENSMUST00000198892 541 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm18225-201ENSMUST00000216708 742 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm26121-201ENSMUST00000083364 162 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm22023-201ENSMUST00000104354 130 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm13755-201ENSMUST00000118509 305 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm23957-201ENSMUST00000157209 90 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.27□□□□□ -1.89
Scn1aA2APX8 Gm21893-201ENSMUST00000179119 397 ntBASIC3.27□□□□□ -1.89
Scn1aA2APX8 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms