Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.11□□□□□ -1.75
H2afb3S4R1G7 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm23709-201ENSMUST00000104364 130 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm15670-201ENSMUST00000117740 447 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm14878-201ENSMUST00000118167 293 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm11346-201ENSMUST00000118346 704 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm14903-201ENSMUST00000122435 537 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm25807-201ENSMUST00000122783 305 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm16114-201ENSMUST00000161930 300 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm22584-201ENSMUST00000177935 92 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Mir496b-201ENSMUST00000184935 113 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm6501-201ENSMUST00000187178 916 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm29634-201ENSMUST00000188467 696 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm5252-201ENSMUST00000189030 909 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm28699-201ENSMUST00000189193 696 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm29454-201ENSMUST00000190805 393 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm43370-201ENSMUST00000196437 284 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm44946-201ENSMUST00000208425 572 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm7624-201ENSMUST00000209702 435 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm2628-201ENSMUST00000218019 426 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm20304-201ENSMUST00000218168 444 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm40692-201ENSMUST00000220411 491 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm25578-201ENSMUST00000083406 104 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
H2afb3S4R1G7 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm13454-201ENSMUST00000118166 483 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm14517-201ENSMUST00000119040 337 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm7189-201ENSMUST00000119811 429 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm12543-201ENSMUST00000120410 543 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm5401-201ENSMUST00000122444 365 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm20428-201ENSMUST00000174365 283 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm27313-201ENSMUST00000183500 142 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm27543-201ENSMUST00000183562 177 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Mir6401-201ENSMUST00000184499 109 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm28263-201ENSMUST00000185884 400 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm28500-201ENSMUST00000190286 151 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm37869-201ENSMUST00000193385 595 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm37353-201ENSMUST00000194497 313 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.09□□□□□ -1.75
H2afb3S4R1G7 Gm17906-201ENSMUST00000202480 901 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms