Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm24254-201ENSMUST00000083702 104 ntBASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Gm10242-201ENSMUST00000090064 330 ntBASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
H2afb1S4R1E0 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.62□□□□□ -1.83
H2afb1S4R1E0 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm23319-201ENSMUST00000104467 131 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm11698-201ENSMUST00000117948 455 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm11881-201ENSMUST00000119408 572 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm12383-201ENSMUST00000120628 760 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm14903-201ENSMUST00000122435 537 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm23789-201ENSMUST00000122536 301 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm16327-201ENSMUST00000137146 228 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm7855-201ENSMUST00000137737 687 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm25665-201ENSMUST00000157695 110 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm3053-201ENSMUST00000161709 616 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm9775-201ENSMUST00000189402 331 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm43651-201ENSMUST00000199796 439 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm18327-201ENSMUST00000202426 830 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm8035-201ENSMUST00000204625 687 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm45523-201ENSMUST00000210712 799 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm45409-201ENSMUST00000211486 252 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 AC164567.4-201ENSMUST00000219708 483 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Mir34b-201ENSMUST00000083558 84 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm10704-201ENSMUST00000098952 730 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.61□□□□□ -1.83
H2afb1S4R1E0 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm25097-201ENSMUST00000104042 145 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm14688-201ENSMUST00000119169 303 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm16100-201ENSMUST00000120489 231 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm11389-201ENSMUST00000121407 430 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm25177-201ENSMUST00000122634 117 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm22453-201ENSMUST00000122801 318 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm6182-201ENSMUST00000156439 1208 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm25979-201ENSMUST00000157177 138 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm23754-201ENSMUST00000157576 63 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm26036-201ENSMUST00000158149 144 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm26933-201ENSMUST00000182320 827 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Mir6537-201ENSMUST00000184150 110 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm27414-201ENSMUST00000185033 381 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm28654-201ENSMUST00000189801 379 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm37603-201ENSMUST00000192368 219 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm37987-201ENSMUST00000194999 825 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm18944-201ENSMUST00000207672 643 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.6□□□□□ -1.83
H2afb1S4R1E0 Gm46234-201ENSMUST00000218702 259 ntBASIC3.6□□□□□ -1.83
H2afb1S4R1E0 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms