Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm29747-201ENSMUST00000194764 585 ntBASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm43104-201ENSMUST00000197234 311 ntBASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm25203-202ENSMUST00000200458 216 ntBASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm25203-201ENSMUST00000082842 215 ntBASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm22956-201ENSMUST00000122520 80 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm22538-201ENSMUST00000158169 299 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm22532-201ENSMUST00000158822 140 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm17421-201ENSMUST00000167845 674 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm21893-201ENSMUST00000179119 397 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm28002-201ENSMUST00000184832 100 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm36382-201ENSMUST00000198892 541 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Olfr844-201ENSMUST00000054106 930 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Olfr895-201ENSMUST00000093864 951 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm22939-201ENSMUST00000103958 131 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm22023-201ENSMUST00000104354 130 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm13504-201ENSMUST00000117490 316 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm7308-201ENSMUST00000121087 447 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm38217-201ENSMUST00000194358 910 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm43925-201ENSMUST00000203498 206 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm26072-201ENSMUST00000083135 107 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.2□□□□□ -1.9
Scn8aQ9WTU3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Gm26140-201ENSMUST00000103807 110 ntBASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Gm11229-201ENSMUST00000121993 437 ntBASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Gm22923-201ENSMUST00000174952 110 ntBASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Gm44393-201ENSMUST00000197418 138 ntBASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Snord21-201ENSMUST00000082519 94 ntBASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn8aQ9WTU3 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm12268-201ENSMUST00000118398 442 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm14240-201ENSMUST00000120353 546 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm15780-201ENSMUST00000121283 935 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm25806-201ENSMUST00000122782 122 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm23380-201ENSMUST00000158448 103 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm4761-201ENSMUST00000178086 582 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm26866-201ENSMUST00000180414 802 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm6064-201ENSMUST00000203999 454 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm44703-201ENSMUST00000205724 248 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Gm6230-201ENSMUST00000208077 780 ntBASIC3.18□□□□□ -1.9
Scn8aQ9WTU3 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms